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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SEPHS1

Summary for SEPHS1

Gene informationGene symbol

SEPHS1

Ensembl ID

ENSG00000086475

Entrez ID

22929

Gene nameselenophosphate synthetase 1
SynonymsSPS|SPS1
Gene typeprotein_coding
UniProtAcc

P49903


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Dataset with differentially expressed gene: SEPHS1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.2775160.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells0.4376596.75e-21

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells-0.2866360.00e+00

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Expression of SEPHS1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SEPHS1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SEPHS1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SEPHS1hsa-miR-128399.0299NM_001195602
SEPHS1hsa-miR-6811-3p98.2063NM_001195602
SEPHS1hsa-miR-498-3p97.6377NM_001195602
SEPHS1hsa-miR-4709-5p96.714NM_001195604
SEPHS1hsa-miR-6835-3p96.5335NM_001195602
SEPHS1hsa-miR-335-5p96.5125NM_001195602
SEPHS1hsa-miR-3616-5p96.4242NM_001195604
SEPHS1hsa-miR-57396.4242NM_001195604
SEPHS1hsa-miR-364696.398NM_001195602
SEPHS1hsa-miR-499b-5p95.7314NM_001195604
SEPHS1hsa-miR-5581-3p95.2694NM_001195602
SEPHS1hsa-miR-129094.3048NM_001195602
SEPHS1hsa-let-7b-3p93.6942NM_001195602
SEPHS1hsa-let-7f-1-3p93.6942NM_001195602
SEPHS1hsa-let-7a-3p93.6942NM_001195602
SEPHS1hsa-miR-98-3p93.6942NM_001195602
SEPHS1hsa-miR-3613-3p92.5406NM_001195602
SEPHS1hsa-miR-219a-2-3p92.0519NM_001195604
SEPHS1hsa-miR-194-5p91.9926NM_001195602
SEPHS1hsa-miR-1213291.821NM_001195602
SEPHS1hsa-miR-218-5p91.8102NM_001195602
SEPHS1hsa-miR-337-3p91.77NM_001195604
SEPHS1hsa-miR-6882-3p91.0961NM_001195602
SEPHS1hsa-miR-808090.7523NM_001195604
SEPHS1hsa-miR-22-3p90.7484NM_001195602
SEPHS1hsa-miR-808790.255NM_001195604
SEPHS1hsa-miR-808489.7579NM_001195604
SEPHS1hsa-miR-366289.4018NM_001195602
SEPHS1hsa-miR-124689.0578NM_001195602
SEPHS1hsa-miR-548an88.9667NM_001195604
SEPHS1hsa-miR-469888.7397NM_001195602
SEPHS1hsa-miR-411-3p88.1532NM_001195602
SEPHS1hsa-miR-379-3p88.1532NM_001195602
SEPHS1hsa-miR-381-3p87.4743NM_001195602
SEPHS1hsa-miR-30087.4743NM_001195602
SEPHS1hsa-miR-876-5p87.3862NM_001195602
SEPHS1hsa-miR-182-5p86.637NM_001195602
SEPHS1hsa-miR-126186.3606NM_001195604
SEPHS1hsa-miR-65785.6772NM_001195604
SEPHS1hsa-miR-1252-3p85.594NM_001195604
SEPHS1hsa-miR-316384.0516NM_001195604
SEPHS1hsa-miR-49683.9849NM_001195604
SEPHS1hsa-miR-316783.5186NM_001195602
SEPHS1hsa-miR-3121-3p82.582NM_001195602
SEPHS1hsa-miR-29a-5p82.31NM_001195604
SEPHS1hsa-miR-1914-5p82.3049NM_001195602
SEPHS1hsa-miR-3121-5p81.3623NM_001195602
SEPHS1hsa-miR-548c-3p80.7059NM_001195602
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Motifs and transcription factors (TFs) regulating SEPHS1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SEPHS1hdpi__NFIXNFIX (directAnnotation).
SEPHS1transfac_pro__M03813POU3F3 (directAnnotation).
SEPHS1hocomoco__MNX1_HUMAN.H11MO.0.DMNX1 (directAnnotation).
SEPHS1hdpi__FOXM1FOXM1 (directAnnotation).
SEPHS1transfac_pro__M06074ZNF732 (directAnnotation).
SEPHS1transfac_pro__M05768ZNF544 (directAnnotation).
SEPHS1dbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
SEPHS1metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
SEPHS1metacluster_34.1ZNF143; ZNF143; ZNF143; ZNF76; ZNF76; ZNF76 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."