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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SEMA4B

Summary for SEMA4B

Gene informationGene symbol

SEMA4B

Ensembl ID

ENSG00000185033

Entrez ID

10509

Gene namesemaphorin 4B
SynonymsKIAA1745|MGC131831|SEMAC|SemC
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: SEMA4B

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells2.13591.36e-16

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.2711320.00e+00

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells-0.6357616.86e-23

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.7476990.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.7844490.00e+00

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Expression of SEMA4B in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SEMA4B

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SEMA4B

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SEMA4Bhsa-miR-431996.1245NM_001324032
SEMA4Bhsa-miR-125a-5p93.5162NM_001324032
SEMA4Bhsa-miR-125b-5p93.5162NM_001324032
SEMA4Bhsa-miR-20a-5p92.8222NM_001324032
SEMA4Bhsa-miR-106b-5p92.8222NM_001324032
SEMA4Bhsa-miR-4477a91.9246NM_198925
SEMA4Bhsa-miR-526b-3p91.239NM_001324032
SEMA4Bhsa-miR-93-5p91.239NM_001324032
SEMA4Bhsa-miR-17-5p91.239NM_001324032
SEMA4Bhsa-miR-106a-5p91.239NM_001324032
SEMA4Bhsa-miR-519d-3p91.239NM_001324032
SEMA4Bhsa-miR-20b-5p91.239NM_001324032
SEMA4Bhsa-miR-548bb-3p91.2116NM_001324032
SEMA4Bhsa-miR-548z91.2116NM_001324032
SEMA4Bhsa-miR-548d-3p91.2116NM_001324032
SEMA4Bhsa-miR-548h-3p91.2116NM_001324032
SEMA4Bhsa-miR-548ac91.2116NM_001324032
SEMA4Bhsa-miR-24-3p90.2568NM_001324032
SEMA4Bhsa-miR-188-5p88.5051NM_198925
SEMA4Bhsa-miR-449b-5p87.5031NM_001324032
SEMA4Bhsa-miR-449a87.5031NM_001324032
SEMA4Bhsa-miR-34c-5p87.5031NM_001324032
SEMA4Bhsa-miR-34a-5p87.5031NM_001324032
SEMA4Bhsa-miR-345-5p86.9491NM_001324032
SEMA4Bhsa-miR-6721-5p85.1459NM_001324032
SEMA4Bhsa-miR-345-3p83.7775NM_001324032
SEMA4Bhsa-miR-497-3p83.5956NM_001324032
SEMA4Bhsa-miR-471082.6658NM_198925
SEMA4Bhsa-miR-301b-5p82.2315NM_001324032
SEMA4Bhsa-miR-301a-5p82.2315NM_001324032
SEMA4Bhsa-miR-23a-3p82.0186NM_001324032
SEMA4Bhsa-miR-23b-3p82.0186NM_001324032
SEMA4Bhsa-miR-23c82.0186NM_001324032
SEMA4Bhsa-miR-6866-3p81.8711NM_198925
SEMA4Bhsa-miR-210-5p81.4689NM_198925
SEMA4Bhsa-miR-499b-5p81.2382NM_198925
SEMA4Bhsa-miR-4796-3p80.7884NM_001324032
SEMA4Bhsa-miR-443780.6038NM_001324032
SEMA4Bhsa-miR-670-5p80.0695NM_001324032
SEMA4Bhsa-miR-608180.0268NM_001324032
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Motifs and transcription factors (TFs) regulating SEMA4B

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SEMA4Bhocomoco__KLF13_HUMAN.H11MO.0.DKLF13 (directAnnotation).
SEMA4Bswissregulon__hs__CHD1CHD1 (directAnnotation).
SEMA4Bmetacluster_198.3ZFP64 (directAnnotation).
SEMA4Bhocomoco__OTX1_HUMAN.H11MO.0.DOTX1 (directAnnotation).
SEMA4Bmetacluster_22.29NFE2 (directAnnotation).
SEMA4Bmetacluster_22.12NFE2; NFE2L1 (directAnnotation).
SEMA4Bmetacluster_30.4BACH1; BACH1; MAFG; MAFG; NFE2; NFE2; NFE2L1; NFE2L1; NFE2L2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."