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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SEMA3A

Summary for SEMA3A

Gene informationGene symbol

SEMA3A

Ensembl ID

ENSG00000075213

Entrez ID

10371

Gene namesemaphorin 3A
Synonymscoll-1|Hsema-I|SEMA1|SEMAD|SemD
Gene typeprotein_coding
UniProtAcc

Q14563


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Dataset with differentially expressed gene: SEMA3A

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells3.241835.35e-07

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Expression of SEMA3A in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SEMA3A

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SEMA3A

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SEMA3Ahsa-miR-32-3p99.3607NM_006080
SEMA3Ahsa-miR-449699.1115NM_006080
SEMA3Ahsa-miR-426199.0236NM_006080
SEMA3Ahsa-miR-147b-5p98.6229NM_006080
SEMA3Ahsa-miR-1212498.0956NM_006080
SEMA3Ahsa-miR-4659b-5p98.0288NM_006080
SEMA3Ahsa-miR-4659a-5p98.0288NM_006080
SEMA3Ahsa-miR-5195-3p96.7682NM_006080
SEMA3Ahsa-miR-145-5p96.7682NM_006080
SEMA3Ahsa-miR-1260b96.5666NM_006080
SEMA3Ahsa-miR-1260a96.5666NM_006080
SEMA3Ahsa-miR-548p96.2189NM_006080
SEMA3Ahsa-miR-367195.777NM_006080
SEMA3Ahsa-miR-335-3p95.5216NM_006080
SEMA3Ahsa-miR-4766-5p95.0204NM_006080
SEMA3Ahsa-miR-5692a94.4468NM_006080
SEMA3Ahsa-miR-199a-3p93.9136NM_006080
SEMA3Ahsa-miR-3129-5p93.9136NM_006080
SEMA3Ahsa-miR-199b-3p93.9136NM_006080
SEMA3Ahsa-miR-153-5p93.7907NM_006080
SEMA3Ahsa-miR-7110-3p93.2235NM_006080
SEMA3Ahsa-miR-366292.6843NM_006080
SEMA3Ahsa-miR-4742-5p92.6304NM_006080
SEMA3Ahsa-miR-4728-3p92.5438NM_006080
SEMA3Ahsa-miR-44892.4742NM_006080
SEMA3Ahsa-miR-379-5p92.431NM_006080
SEMA3Ahsa-miR-106a-3p92.4015NM_006080
SEMA3Ahsa-miR-4482-3p92.367NM_006080
SEMA3Ahsa-miR-135b-5p92.2645NM_006080
SEMA3Ahsa-miR-135a-5p92.2645NM_006080
SEMA3Ahsa-miR-205-3p92.1899NM_006080
SEMA3Ahsa-miR-3529-5p92.0417NM_006080
SEMA3Ahsa-miR-6505-5p92.0104NM_006080
SEMA3Ahsa-miR-4774-3p91.8553NM_006080
SEMA3Ahsa-miR-510-3p91.6166NM_006080
SEMA3Ahsa-miR-4659b-3p91.4385NM_006080
SEMA3Ahsa-miR-4659a-3p91.4385NM_006080
SEMA3Ahsa-miR-217-5p91.2805NM_006080
SEMA3Ahsa-miR-539-5p91.1321NM_006080
SEMA3Ahsa-miR-365b-3p90.727NM_006080
SEMA3Ahsa-miR-365a-3p90.727NM_006080
SEMA3Ahsa-miR-22-5p90.4516NM_006080
SEMA3Ahsa-miR-16-5p90.4515NM_006080
SEMA3Ahsa-miR-195-5p90.4515NM_006080
SEMA3Ahsa-miR-15a-5p90.4515NM_006080
SEMA3Ahsa-miR-15b-5p90.4515NM_006080
SEMA3Ahsa-miR-6838-5p90.4515NM_006080
SEMA3Ahsa-miR-92b-3p90.1775NM_006080
SEMA3Ahsa-miR-92a-3p90.1775NM_006080
SEMA3Ahsa-miR-32-5p90.1775NM_006080
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Motifs and transcription factors (TFs) regulating SEMA3A

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SEMA3Ahocomoco__KLF13_HUMAN.H11MO.0.DKLF13 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."