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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SEC24D

Summary for SEC24D

Gene informationGene symbol

SEC24D

Ensembl ID

ENSG00000150961

Entrez ID

9871

Gene nameSEC24 homolog D, COPII coat complex component
SynonymsKIAA0755
Gene typeprotein_coding
UniProtAcc

O94855


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Dataset with differentially expressed gene: SEC24D

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.3544170.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.444030.00e+00

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Expression of SEC24D in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SEC24D

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SEC24D

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SEC24Dhsa-miR-432896.354NM_001318066
SEC24Dhsa-miR-211-5p95.494NM_001318066
SEC24Dhsa-miR-204-5p95.494NM_001318066
SEC24Dhsa-miR-4423-3p95.4091NM_001318066
SEC24Dhsa-miR-642b-5p95.208NM_014822
SEC24Dhsa-miR-875-3p95.0162NM_001318066
SEC24Dhsa-miR-6508-5p94.0471NM_001318066
SEC24Dhsa-miR-593-5p93.9427NM_001318066
SEC24Dhsa-miR-9851-3p93.9427NM_001318066
SEC24Dhsa-miR-806792.6472NM_001318066
SEC24Dhsa-miR-6814-5p91.8375NM_001318066
SEC24Dhsa-let-7c-3p91.5833NM_001318066
SEC24Dhsa-miR-5011-5p90.895NM_001318066
SEC24Dhsa-miR-3663-3p90.6307NM_001318066
SEC24Dhsa-miR-449590.5376NM_001318066
SEC24Dhsa-miR-5006-3p89.9862NM_001318066
SEC24Dhsa-miR-4755-5p89.9862NM_001318066
SEC24Dhsa-miR-4650-3p89.952NM_001318066
SEC24Dhsa-miR-94489.5645NM_001318066
SEC24Dhsa-miR-62389.3373NM_001318066
SEC24Dhsa-miR-5692a89.0958NM_001318066
SEC24Dhsa-miR-128488.9362NM_001318066
SEC24Dhsa-miR-5579-5p88.7974NM_001318066
SEC24Dhsa-let-7d-3p88.4248NM_001318066
SEC24Dhsa-miR-605-5p88.1951NM_001318066
SEC24Dhsa-miR-6731-5p87.1353NM_001318066
SEC24Dhsa-miR-808587.1353NM_001318066
SEC24Dhsa-miR-32-3p86.5869NM_001318066
SEC24Dhsa-miR-368686.0251NM_001318066
SEC24Dhsa-miR-302c-5p85.3731NM_001318066
SEC24Dhsa-miR-124-5p85.3186NM_001318066
SEC24Dhsa-miR-5582-5p85.268NM_001318066
SEC24Dhsa-miR-493-5p81.5468NM_001318066
SEC24Dhsa-miR-29a-3p81.2561NM_001318066
SEC24Dhsa-miR-3622a-5p81.2557NM_001318066
SEC24Dhsa-miR-806281.0465NM_001318066
SEC24Dhsa-miR-6831-5p80.2705NM_001318066
SEC24Dhsa-miR-152-5p80.1783NM_001318066
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Motifs and transcription factors (TFs) regulating SEC24D

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SEC24Dkznf__ZNF282_Imbeault2017_OM_RCADEZNF282 (directAnnotation).
SEC24Dmetacluster_144.3ZNF704; ZNF704 (directAnnotation).
SEC24Dcisbp__M00968MTF2 (directAnnotation).
SEC24Dmetacluster_160.20JUND; PRDM15 (directAnnotation).
SEC24Dmetacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
SEC24Dmetacluster_61.1DEAF1; DEAF1 (directAnnotation).
SEC24Dkznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
SEC24Dmetacluster_175.1ZNF283 (directAnnotation).
SEC24Dtransfac_pro__M02844BCL6B (inferredBy_Orthology).
SEC24Dmetacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
SEC24Dkznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
SEC24Dmetacluster_151.2ZNF23 (directAnnotation).
SEC24Dtransfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."