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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: SDHD

Summary for SDHD

Gene informationGene symbol

SDHD

Ensembl ID

ENSG00000204370

Entrez ID

6392

Gene namesuccinate dehydrogenase complex subunit D
SynonymscybS|PGL|PGL1
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: SDHD

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells0.5341841.42e-07

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.9936930.00e+00

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells-0.2860940.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells0.2969360.00e+00

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.3172549.55e-19

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.4342182.81e-28

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells-0.2814891.31e-08

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells0.5868960.00e+00

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Expression of SDHD in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SDHD

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SDHD

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SDHDhsa-miR-320b98.1668NM_001276506
SDHDhsa-miR-320c98.1668NM_001276506
SDHDhsa-miR-320d98.1668NM_001276506
SDHDhsa-miR-320a-3p98.1668NM_001276506
SDHDhsa-miR-442998.1668NM_001276506
SDHDhsa-miR-6875-3p96.9693NM_001276504
SDHDhsa-miR-670-3p96.7152NM_001276504
SDHDhsa-miR-5571-3p94.0243NM_001276504
SDHDhsa-miR-92493.9118NM_001276504
SDHDhsa-miR-2467-3p92.7158NM_001276506
SDHDhsa-miR-410-3p92.047NM_001276504
SDHDhsa-miR-4753-3p91.2343NM_001276506
SDHDhsa-miR-4766-5p90.316NM_001276506
SDHDhsa-miR-544a90.2184NM_001276506
SDHDhsa-miR-23a-3p87.8088NM_001276504
SDHDhsa-miR-23b-3p87.8088NM_001276504
SDHDhsa-miR-23c87.8088NM_001276504
SDHDhsa-miR-96-3p86.9838NM_001276504
SDHDhsa-miR-3059-5p86.9123NM_001276504
SDHDhsa-miR-7154-5p85.117NM_001276504
SDHDhsa-miR-450a-1-3p84.0802NM_001276504
SDHDhsa-miR-27b-5p82.2526NM_001276504
SDHDhsa-miR-1238-3p81.2821NM_001276504
SDHDhsa-miR-93880.5613NM_001276504
SDHDhsa-miR-4755-5p80.5347NM_001276506
SDHDhsa-miR-5006-3p80.5347NM_001276506
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Motifs and transcription factors (TFs) regulating SDHD

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SDHDhdpi__FLI1FLI1 (directAnnotation).
SDHDmetacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
SDHD"2-Hexyloxy-6-Hydroxymethyl-Tetrahydro-Pyran-3,4,5-Triol"

DB04141

small molecule
SDHD"Hexachlorophene"

DB00756

small molecule
SDHD"Ubiquinone Q1"

DB08689

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."