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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SDE2

Summary for SDE2

Gene informationGene symbol

SDE2

Ensembl ID

ENSG00000143751

Entrez ID

163859

Gene nameSDE2 telomere maintenance homolog
SynonymsC1orf55|FLJ35382
Gene typeprotein_coding
UniProtAcc

Q6IQ49


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Dataset with differentially expressed gene: SDE2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells-0.2769066.03e-05

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Expression of SDE2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SDE2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SDE2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SDE2hsa-miR-616-5p99.3753NM_152608
SDE2hsa-miR-373-5p99.3753NM_152608
SDE2hsa-miR-371b-5p99.3753NM_152608
SDE2hsa-miR-316399.3375NM_152608
SDE2hsa-miR-449993.5056NM_152608
SDE2hsa-miR-365892.6568NM_152608
SDE2hsa-miR-208b-5p90.2879NM_152608
SDE2hsa-miR-208a-5p90.2879NM_152608
SDE2hsa-miR-889-3p90.068NM_152608
SDE2hsa-miR-127690.0498NM_152608
SDE2hsa-miR-6715a-3p89.8831NM_152608
SDE2hsa-miR-379-5p88.657NM_152608
SDE2hsa-miR-128388.2387NM_152608
SDE2hsa-miR-95-5p87.9992NM_152608
SDE2hsa-miR-58387.6266NM_152608
SDE2hsa-miR-474487.4367NM_152608
SDE2hsa-miR-3529-5p87.2406NM_152608
SDE2hsa-miR-55986.9192NM_152608
SDE2hsa-miR-361886.5994NM_152608
SDE2hsa-miR-548ae-5p86.0902NM_152608
SDE2hsa-miR-548i86.0902NM_152608
SDE2hsa-miR-548y86.0902NM_152608
SDE2hsa-miR-548ab86.0902NM_152608
SDE2hsa-miR-548aq-5p86.0902NM_152608
SDE2hsa-miR-548a-5p86.0902NM_152608
SDE2hsa-miR-548b-5p86.0902NM_152608
SDE2hsa-miR-548ay-5p86.0902NM_152608
SDE2hsa-miR-548j-5p86.0902NM_152608
SDE2hsa-miR-548o-5p86.0902NM_152608
SDE2hsa-miR-548d-5p86.0902NM_152608
SDE2hsa-miR-548ad-5p86.0902NM_152608
SDE2hsa-miR-548w86.0902NM_152608
SDE2hsa-miR-548am-5p86.0902NM_152608
SDE2hsa-miR-548c-5p86.0902NM_152608
SDE2hsa-miR-548au-5p86.0902NM_152608
SDE2hsa-miR-548ap-5p86.0902NM_152608
SDE2hsa-miR-548ar-5p86.0902NM_152608
SDE2hsa-miR-548h-5p86.0902NM_152608
SDE2hsa-miR-548ak86.0902NM_152608
SDE2hsa-miR-548bb-5p86.0902NM_152608
SDE2hsa-miR-548as-5p86.0902NM_152608
SDE2hsa-miR-6715b-3p85.7389NM_152608
SDE2hsa-miR-4650-3p85.66NM_152608
SDE2hsa-miR-545-5p85.6378NM_152608
SDE2hsa-miR-366884.4443NM_152608
SDE2hsa-miR-651-3p83.8477NM_152608
SDE2hsa-miR-548ar-3p83.1317NM_152608
SDE2hsa-miR-6830-5p82.9758NM_152608
SDE2hsa-miR-338-5p82.2364NM_152608
SDE2hsa-miR-3613-3p81.8884NM_152608
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Motifs and transcription factors (TFs) regulating SDE2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SDE2taipale_cyt_meth__CREB1_NRTGACGTN_eDBD_reprCREB1 (directAnnotation).
SDE2transfac_pro__M01783SP2 (directAnnotation).
SDE2metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
SDE2metacluster_111.3ATF1; ATF3; CREB1; CREB1; CREB1; CREB1; CREB1; CREM; CREM; CREM; CREM; E4F1; E4F1 (directAnnotation). CREB1; CREB1; CREM; JDP2 (inferredBy_Orthology).
SDE2jaspar__MA0604.1ATF1 (inferredBy_Orthology).
SDE2dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."