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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SCYL2

Summary for SCYL2

Gene informationGene symbol

SCYL2

Ensembl ID

ENSG00000136021

Entrez ID

55681

Gene nameSCY1 like pseudokinase 2
SynonymsCVAK104|KIAA1360
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: SCYL2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells-0.5000830.00e+00

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepostMalignant cells0.353181.36e-12

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3376521.63e-28

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Expression of SCYL2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SCYL2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SCYL2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SCYL2hsa-miR-548ac98.7539NM_001317784
SCYL2hsa-miR-548z98.7539NM_001317784
SCYL2hsa-miR-548bb-3p98.7539NM_001317784
SCYL2hsa-miR-548h-3p98.7539NM_001317784
SCYL2hsa-miR-548d-3p98.7539NM_001317784
SCYL2hsa-miR-335-3p97.2553NM_001317784
SCYL2hsa-miR-548x-3p97.0691NM_001317784
SCYL2hsa-miR-548aj-3p97.0691NM_001317784
SCYL2hsa-miR-366296.3978NM_001317784
SCYL2hsa-miR-34a-3p96.3325NM_001317784
SCYL2hsa-miR-520d-5p95.3969NM_001317784
SCYL2hsa-miR-524-5p95.3969NM_001317784
SCYL2hsa-miR-548ah-3p95.3325NM_001317784
SCYL2hsa-miR-548j-3p95.3325NM_001317784
SCYL2hsa-miR-548ae-3p95.3325NM_001317784
SCYL2hsa-miR-548am-3p95.3325NM_001317784
SCYL2hsa-miR-548aq-3p95.3325NM_001317784
SCYL2hsa-miR-510-3p95.2465NM_001317784
SCYL2hsa-miR-364694.2155NM_001317784
SCYL2hsa-miR-203a-3p94.0038NM_001317784
SCYL2hsa-miR-129493.3855NM_001317784
SCYL2hsa-miR-998693.3855NM_001317784
SCYL2hsa-miR-561-3p93.0112NM_001317784
SCYL2hsa-miR-4738-3p92.6671NM_001317784
SCYL2hsa-miR-10523-5p92.6182NM_001317784
SCYL2hsa-miR-1304-5p91.7694NM_001317784
SCYL2hsa-miR-432590.4834NM_001317784
SCYL2hsa-miR-50790.3628NM_001317784
SCYL2hsa-miR-428289.7794NM_001317784
SCYL2hsa-miR-452-3p89.3336NM_001317784
SCYL2hsa-miR-6769b-3p89.2288NM_001317784
SCYL2hsa-miR-4723-3p89.2288NM_001317784
SCYL2hsa-miR-318389.2288NM_001317784
SCYL2hsa-miR-442688.8526NM_001317784
SCYL2hsa-miR-488-5p88.0925NM_001317784
SCYL2hsa-miR-590-3p87.8564NM_001317784
SCYL2hsa-miR-55786.2297NM_001317784
SCYL2hsa-miR-5007-3p86.1493NM_001317784
SCYL2hsa-miR-182785.5356NM_001317784
SCYL2hsa-miR-205-5p85.139NM_001317784
SCYL2hsa-miR-766-5p84.6931NM_001317784
SCYL2hsa-miR-464784.5103NM_001317784
SCYL2hsa-miR-4662b84.5103NM_001317784
SCYL2hsa-miR-4799-5p84.4875NM_001317784
SCYL2hsa-miR-1022683.9634NM_001317784
SCYL2hsa-miR-1212283.5048NM_001317784
SCYL2hsa-miR-10395-5p82.9721NM_001317784
SCYL2hsa-miR-758-5p82.0906NM_001317784
SCYL2hsa-miR-3912-3p81.5786NM_001317784
SCYL2hsa-miR-545-3p80.7627NM_001317784
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Motifs and transcription factors (TFs) regulating SCYL2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SCYL2taipale_tf_pairs__ATF4_TEF_RNMTGATGCAATN_CAPATF4; TEF (directAnnotation).
SCYL2jaspar__MA0604.1ATF1 (inferredBy_Orthology).
SCYL2dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
SCYL2taipale_tf_pairs__ATF4_CEBPD_NGATGATGCAATNN_CAPATF4; CEBPD (directAnnotation).
SCYL2metacluster_135.11NR2C2 (directAnnotation).
SCYL2metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
SCYL2metacluster_144.3ZNF704; ZNF704 (directAnnotation).
SCYL2metacluster_7.13ZFX (directAnnotation).
SCYL2kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
SCYL2cisbp__M00968MTF2 (directAnnotation).
SCYL2metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
SCYL2metacluster_160.20JUND; PRDM15 (directAnnotation).
SCYL2cisbp__M00341PAX6 (directAnnotation).
SCYL2metacluster_198.3ZFP64 (directAnnotation).
SCYL2metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
SCYL2metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
SCYL2jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
SCYL2metacluster_61.1DEAF1; DEAF1 (directAnnotation).
SCYL2cisbp__M00788ZFY (inferredBy_Orthology).
SCYL2kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
SCYL2metacluster_175.1ZNF283 (directAnnotation).
SCYL2hdpi__ZNF304ZNF304 (directAnnotation).
SCYL2transfac_pro__M02844BCL6B (inferredBy_Orthology).
SCYL2metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
SCYL2metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
SCYL2transfac_pro__M01199TRIM28 (directAnnotation).
SCYL2kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
SCYL2metacluster_151.2ZNF23 (directAnnotation).
SCYL2transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
SCYL2transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
SCYL2transfac_pro__M03806ZBTB7C (directAnnotation).
SCYL2transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
SCYL2transfac_pro__M06441ZSCAN30 (directAnnotation).
SCYL2metacluster_114.2OSR1; OSR2 (directAnnotation). OSR2 (inferredBy_Orthology).
SCYL2taipale_cyt_meth__ZNF460_NAACGCCCCCCGN_eDBD_reprZNF460 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."