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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SCG2

Summary for SCG2

Gene informationGene symbol

SCG2

Ensembl ID

ENSG00000171951

Entrez ID

7857

Gene namesecretogranin II
SynonymsCHGC|SgII|SN
Gene typeprotein_coding
UniProtAcc

P13521


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Dataset with differentially expressed gene: SCG2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.3068640.00e+00

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Expression of SCG2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SCG2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SCG2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SCG2hsa-miR-314397.5504NM_003469
SCG2hsa-miR-54395.8565NM_003469
SCG2hsa-miR-848593.9548NM_003469
SCG2hsa-miR-10399-5p93.589NM_003469
SCG2hsa-miR-6504-3p93.589NM_003469
SCG2hsa-miR-548x-3p93.0496NM_003469
SCG2hsa-miR-548aj-3p93.0496NM_003469
SCG2hsa-miR-480192.8449NM_003469
SCG2hsa-miR-4645-3p92.5849NM_003469
SCG2hsa-miR-5692a92.2046NM_003469
SCG2hsa-miR-548aq-3p91.4205NM_003469
SCG2hsa-miR-548ae-3p91.4205NM_003469
SCG2hsa-miR-548j-3p91.4205NM_003469
SCG2hsa-miR-548ah-3p91.4205NM_003469
SCG2hsa-miR-548am-3p91.4205NM_003469
SCG2hsa-miR-119791.2839NM_003469
SCG2hsa-miR-1245b-5p91.0589NM_003469
SCG2hsa-miR-314291.0589NM_003469
SCG2hsa-miR-5582-3p90.8757NM_003469
SCG2hsa-miR-4731-3p90.4823NM_003469
SCG2hsa-miR-95-5p90.1232NM_003469
SCG2hsa-miR-7106-5p87.7639NM_003469
SCG2hsa-miR-6847-5p87.1728NM_003469
SCG2hsa-miR-568886.6212NM_003469
SCG2hsa-miR-155-5p86.2157NM_003469
SCG2hsa-miR-19886.0383NM_003469
SCG2hsa-miR-7-2-3p85.3661NM_003469
SCG2hsa-miR-7-1-3p85.3661NM_003469
SCG2hsa-miR-495-3p85.3661NM_003469
SCG2hsa-miR-442584.2429NM_003469
SCG2hsa-miR-463583.5254NM_003469
SCG2hsa-miR-548d-3p82.7181NM_003469
SCG2hsa-miR-548h-3p82.7181NM_003469
SCG2hsa-miR-548z82.7181NM_003469
SCG2hsa-miR-548bb-3p82.7181NM_003469
SCG2hsa-miR-548ac82.7181NM_003469
SCG2hsa-miR-990282.6176NM_003469
SCG2hsa-miR-132480.7259NM_003469
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Motifs and transcription factors (TFs) regulating SCG2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SCG2kznf__ZNF25_Imbeault2017_OM_MEMEZNF25 (directAnnotation).
Page: 1

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."