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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RNF216

Summary for RNF216

Gene informationGene symbol

RNF216

Ensembl ID

ENSG00000011275

Entrez ID

54476

Gene namering finger protein 216
SynonymsTRIAD3|UBCE7IP1|ZIN
Gene typeprotein_coding
UniProtAcc

Q9NWF9


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Dataset with differentially expressed gene: RNF216

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells0.2501061.29e-10

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.2870657.13e-42

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Expression of RNF216 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RNF216

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating RNF216

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RNF216hsa-miR-130b-3p94.9597NM_207111
RNF216hsa-miR-454-3p94.9597NM_207111
RNF216hsa-miR-429594.9597NM_207111
RNF216hsa-miR-130a-3p94.9597NM_207111
RNF216hsa-miR-301a-3p94.9597NM_207111
RNF216hsa-miR-301b-3p94.9597NM_207111
RNF216hsa-miR-366694.8145NM_207111
RNF216hsa-miR-7856-5p94.2052NM_207111
RNF216hsa-miR-394194.11NM_207111
RNF216hsa-miR-6764-5p93.6754NM_207116
RNF216hsa-miR-613292.4269NM_207116
RNF216hsa-miR-6836-5p92.4269NM_207116
RNF216hsa-miR-848591.9779NM_207111
RNF216hsa-miR-371491.6494NM_207111
RNF216hsa-miR-5580-3p90.8096NM_207111
RNF216hsa-miR-467290.6532NM_207111
RNF216hsa-miR-519a-3p90.5757NM_207111
RNF216hsa-miR-519c-3p90.5757NM_207111
RNF216hsa-miR-519b-3p90.5757NM_207111
RNF216hsa-miR-1915-3p90.3849NM_207116
RNF216hsa-let-7f-1-3p90.1525NM_207111
RNF216hsa-miR-98-3p90.1525NM_207111
RNF216hsa-let-7b-3p90.1525NM_207111
RNF216hsa-let-7a-3p90.1525NM_207111
RNF216hsa-miR-6882-3p89.7925NM_207116
RNF216hsa-miR-302e87.6048NM_207111
RNF216hsa-miR-46687.4132NM_207111
RNF216hsa-miR-4477b85.7977NM_207111
RNF216hsa-miR-10524-5p85.713NM_207116
RNF216hsa-miR-520g-3p85.2791NM_207111
RNF216hsa-miR-520h85.2791NM_207111
RNF216hsa-miR-6852-5p84.417NM_207116
RNF216hsa-miR-1207-5p84.3612NM_207116
RNF216hsa-miR-19b-3p84.2988NM_207111
RNF216hsa-miR-19a-3p84.2988NM_207111
RNF216hsa-miR-472983.8907NM_207111
RNF216hsa-miR-302a-3p83.2646NM_207111
RNF216hsa-miR-302d-3p83.2646NM_207111
RNF216hsa-miR-302c-3p83.2646NM_207111
RNF216hsa-miR-302b-3p83.2646NM_207111
RNF216hsa-miR-520d-5p82.2763NM_207111
RNF216hsa-miR-524-5p82.2763NM_207111
RNF216hsa-miR-4639-5p82.1175NM_207111
RNF216hsa-miR-373-3p81.5907NM_207111
RNF216hsa-miR-520c-3p81.5907NM_207111
RNF216hsa-miR-520e-3p81.5907NM_207111
RNF216hsa-miR-372-3p81.5907NM_207111
RNF216hsa-miR-520d-3p81.5907NM_207111
RNF216hsa-miR-520b-3p81.5907NM_207111
RNF216hsa-miR-520a-3p81.5907NM_207111
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Motifs and transcription factors (TFs) regulating RNF216

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RNF216metacluster_7.13ZFX (directAnnotation).
RNF216taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
RNF216metacluster_151.2ZNF23 (directAnnotation).
RNF216metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
RNF216kznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
RNF216metacluster_144.3ZNF704; ZNF704 (directAnnotation).
RNF216hdpi__ETV4ETV4 (directAnnotation).
RNF216transfac_pro__M05628ZNF735 (directAnnotation).
RNF216metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
RNF216transfac_pro__M01253CNOT3 (directAnnotation).
RNF216transfac_pro__M04817ZBTB33 (directAnnotation).
RNF216cisbp__M07938E2F1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."