DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target< (This gene does not contain this module)

Gene: RNF2

Summary for RNF2

Gene informationGene symbol

RNF2

Ensembl ID

ENSG00000121481

Entrez ID

6045

Gene namering finger protein 2
SynonymsBAP-1|BAP1|DING|HIPI3|RING1B|RING2
Gene typeprotein_coding
UniProtAcc

Q99496


Top

Dataset with differentially expressed gene: RNF2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.2602230.00e+00

Top

Expression of RNF2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to RNF2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

RNF2

Unusual Activation of Pro-survival Pathway
Page: 1

Top

MicroRNAs (miRNA) regulating RNF2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RNF2hsa-miR-314899.4883NM_007212
RNF2hsa-miR-4668-5p99.348NM_007212
RNF2hsa-miR-366298.1113NM_007212
RNF2hsa-miR-366096.549NM_007212
RNF2hsa-miR-452696.549NM_007212
RNF2hsa-miR-3613-3p96.0502NM_007212
RNF2hsa-miR-92295.7784NM_007212
RNF2hsa-miR-149-5p94.6781NM_007212
RNF2hsa-miR-302d-5p94.1355NM_007212
RNF2hsa-miR-302b-5p94.1355NM_007212
RNF2hsa-miR-6819-5p93.5912NM_007212
RNF2hsa-miR-6737-5p93.5912NM_007212
RNF2hsa-miR-314393.5573NM_007212
RNF2hsa-miR-6812-5p92.6424NM_007212
RNF2hsa-miR-200c-3p92.391NM_007212
RNF2hsa-miR-42992.391NM_007212
RNF2hsa-miR-200b-3p92.391NM_007212
RNF2hsa-miR-889-3p92.3661NM_007212
RNF2hsa-miR-24-3p91.8677NM_007212
RNF2hsa-miR-316391.5754NM_007212
RNF2hsa-miR-4693-5p91.2468NM_007212
RNF2hsa-miR-186-5p90.8595NM_007212
RNF2hsa-miR-6824-3p90.8185NM_007212
RNF2hsa-miR-6764-3p90.8185NM_007212
RNF2hsa-miR-313390.7779NM_007212
RNF2hsa-miR-3912-5p90.4106NM_007212
RNF2hsa-miR-4731-3p90.3565NM_007212
RNF2hsa-miR-480189.9765NM_007212
RNF2hsa-miR-4474-3p89.963NM_007212
RNF2hsa-miR-806089.6762NM_007212
RNF2hsa-miR-990289.6032NM_007212
RNF2hsa-miR-6783-3p89.1976NM_007212
RNF2hsa-miR-1252-3p89.0224NM_007212
RNF2hsa-miR-202-5p88.8021NM_007212
RNF2hsa-miR-7856-5p86.8054NM_007212
RNF2hsa-miR-1213686.3361NM_007212
RNF2hsa-miR-302a-5p86.3176NM_007212
RNF2hsa-miR-128486.2638NM_007212
RNF2hsa-miR-429185.9394NM_007212
RNF2hsa-miR-6797-3p85.8723NM_007212
RNF2hsa-miR-1343-3p85.4898NM_007212
RNF2hsa-miR-548ar-3p84.8466NM_007212
RNF2hsa-miR-6749-3p84.1162NM_007212
RNF2hsa-miR-10526-3p83.8577NM_007212
RNF2hsa-miR-3688-3p83.7619NM_007212
RNF2hsa-miR-5585-3p83.6315NM_007212
RNF2hsa-miR-607683.4883NM_007212
RNF2hsa-miR-500a-5p83.4454NM_007212
RNF2hsa-miR-548n83.298NM_007212
RNF2hsa-miR-58783.2821NM_007212
Page: 1 2

Top

Motifs and transcription factors (TFs) regulating RNF2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RNF2metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
RNF2metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
RNF2dbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
RNF2metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
RNF2metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
RNF2taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
RNF2taipale_tf_pairs__ERF_HES7_NNCACGTGNNNNCCGGAANN_CAP_reprERF; HES7 (directAnnotation).
RNF2metacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
RNF2transfac_pro__M00652NRF1 (directAnnotation).
RNF2hdpi__ETV4ETV4 (directAnnotation).
RNF2taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
RNF2transfac_pro__M04866HDAC2 (directAnnotation).
RNF2jaspar__MA1122.1TFDP1 (directAnnotation).
RNF2metacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
RNF2swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
RNF2metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
RNF2taipale_tf_pairs__TFAP2C_MAX_TNSCCNNNGGSNNNCACGTGN_CAP_reprMAX; TFAP2C (directAnnotation).
Page: 1

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."