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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RNF144B

Summary for RNF144B

Gene informationGene symbol

RNF144B

Ensembl ID

ENSG00000137393

Entrez ID

255488

Gene namering finger protein 144B
SynonymsbA528A10.3|IBRDC2|P53RFP
Gene typeprotein_coding
UniProtAcc

Q7Z419


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Dataset with differentially expressed gene: RNF144B

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro0.3091226.03e-44

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)preMono/Macro-0.3423042.91e-31

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMono/Macro0.3411690.00e+00

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Expression of RNF144B in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RNF144B

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating RNF144B

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RNF144Bhsa-miR-6809-5p98.8567NM_182757
RNF144Bhsa-miR-314898.1152NM_182757
RNF144Bhsa-miR-15a-5p96.5408NM_182757
RNF144Bhsa-miR-15b-5p96.5408NM_182757
RNF144Bhsa-miR-195-5p96.2867NM_182757
RNF144Bhsa-miR-16-5p96.2867NM_182757
RNF144Bhsa-miR-424-5p96.1997NM_182757
RNF144Bhsa-miR-497-5p96.1997NM_182757
RNF144Bhsa-miR-6838-5p96.1997NM_182757
RNF144Bhsa-miR-848595.7055NM_182757
RNF144Bhsa-miR-4524a-5p94.3444NM_182757
RNF144Bhsa-miR-4524b-5p94.3444NM_182757
RNF144Bhsa-miR-64693.6338NM_182757
RNF144Bhsa-miR-361293.3009NM_182757
RNF144Bhsa-miR-65093.3009NM_182757
RNF144Bhsa-miR-503-5p93.1461NM_182757
RNF144Bhsa-miR-519d-5p92.875NM_182757
RNF144Bhsa-miR-60792.5832NM_182757
RNF144Bhsa-miR-365889.8463NM_182757
RNF144Bhsa-miR-428688.7744NM_182757
RNF144Bhsa-miR-366287.1307NM_182757
RNF144Bhsa-miR-4727-5p87.067NM_182757
RNF144Bhsa-miR-490-3p86.4325NM_182757
RNF144Bhsa-miR-4695-5p85.7747NM_182757
RNF144Bhsa-miR-4482-3p85.6555NM_182757
RNF144Bhsa-miR-394185.1689NM_182757
RNF144Bhsa-miR-3145-5p84.8207NM_182757
RNF144Bhsa-miR-3613-3p84.1578NM_182757
RNF144Bhsa-miR-144-5p83.8033NM_182757
RNF144Bhsa-miR-31-5p83.623NM_182757
RNF144Bhsa-miR-7111-3p83.3868NM_182757
RNF144Bhsa-miR-616-3p82.6876NM_182757
RNF144Bhsa-miR-397382.6296NM_182757
RNF144Bhsa-miR-4474-3p81.7586NM_182757
RNF144Bhsa-miR-519e-5p81.1797NM_182757
RNF144Bhsa-miR-515-5p81.1797NM_182757
RNF144Bhsa-miR-429380.7509NM_182757
RNF144Bhsa-miR-364680.2415NM_182757
RNF144Bhsa-miR-5003-5p80.0088NM_182757
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Motifs and transcription factors (TFs) regulating RNF144B

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RNF144Btransfac_pro__M05611SALL3 (directAnnotation).
RNF144Bmetacluster_188.1FOXN2; FOXO4 (directAnnotation). FOXJ1; FOXO3 (inferredBy_Orthology).
RNF144Btaipale_tf_pairs__MGA_DLX2_SYAATTANWGGTGYGA_CAPDLX2; MGA (directAnnotation).
RNF144Bmetacluster_155.11SPZ1 (directAnnotation).
RNF144Btransfac_pro__M01088DEAF1 (inferredBy_Orthology).
RNF144Bmetacluster_160.20JUND; PRDM15 (directAnnotation).
RNF144Btfdimers__MD00167HIC1; MAFA (directAnnotation).
RNF144Bhdpi__HTATIP2HTATIP2 (directAnnotation).
RNF144Bcisbp__M01733CCDC169-SOHLH2; SOHLH2 (inferredBy_Orthology).
RNF144Bmetacluster_61.1DEAF1; DEAF1 (directAnnotation).
RNF144Btransfac_public__M00005TFAP4 (directAnnotation).
RNF144Bmetacluster_115.1NEUROD1; PHF1; ZBTB20; ZNF17; ZNF296; ZNF350; ZNF486; ZNF574; ZNF589; ZNF891 (directAnnotation). IRF4; IRF6; PRDM5 (inferredBy_Orthology).
RNF144Btransfac_pro__M01240GTF2IRD1 (directAnnotation).
RNF144Btransfac_pro__M06553ZNF420 (directAnnotation).
RNF144Btfdimers__MD00012ETS1; YY1 (directAnnotation).
RNF144Bkznf__ZNF77_Imbeault2017_OM_MEMEZNF77 (directAnnotation).
RNF144Btfdimers__MD00342IRF1; YY1 (directAnnotation).
RNF144Bdbtfbs__NCOA3_MCF-7_ENCSR573OJP_merged_N2NCOA3 (directAnnotation).
RNF144Btransfac_pro__M06485ZNF808 (directAnnotation).
RNF144Btransfac_pro__M06531ZNF555 (directAnnotation).
RNF144Btransfac_pro__M05387ZNF653 (inferredBy_Orthology).
RNF144Btransfac_pro__M06737ZNF226 (directAnnotation).
RNF144Btransfac_pro__M05896ZNF713 (directAnnotation).
RNF144Bjaspar__MA1963.1SATB1 (directAnnotation).
RNF144Btransfac_pro__M05743ZNF57 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."