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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RNF141

Summary for RNF141

Gene informationGene symbol

RNF141

Ensembl ID

ENSG00000110315

Entrez ID

50862

Gene namering finger protein 141
SynonymsZFP26|ZNF230
Gene typeprotein_coding
UniProtAcc

Q8WVD5


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Dataset with differentially expressed gene: RNF141

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.5133320.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells0.2838490.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.4070470.00e+00

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Expression of RNF141 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RNF141

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating RNF141

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RNF141hsa-miR-548p99.7495NM_016422
RNF141hsa-miR-7-5p96.0054NM_016422
RNF141hsa-miR-561-3p94.9496NM_016422
RNF141hsa-miR-651-3p93.9029NM_016422
RNF141hsa-miR-5692a93.5555NM_016422
RNF141hsa-miR-129793.241NM_016422
RNF141hsa-miR-316393.1889NM_016422
RNF141hsa-miR-453092.3174NM_016422
RNF141hsa-miR-607792.2129NM_016422
RNF141hsa-miR-998591.6421NM_016422
RNF141hsa-miR-27b-3p91.6421NM_016422
RNF141hsa-miR-27a-3p91.6421NM_016422
RNF141hsa-miR-5011-5p91.4227NM_016422
RNF141hsa-miR-608390.8499NM_016422
RNF141hsa-miR-92a-3p90.6209NM_016422
RNF141hsa-miR-92b-3p90.6209NM_016422
RNF141hsa-miR-32-5p90.6209NM_016422
RNF141hsa-miR-26a-5p90.135NM_016422
RNF141hsa-miR-26b-5p90.135NM_016422
RNF141hsa-miR-6805-5p89.5159NM_016422
RNF141hsa-miR-6515-3p89.129NM_016422
RNF141hsa-miR-367-3p89.0608NM_016422
RNF141hsa-miR-25-3p89.0608NM_016422
RNF141hsa-miR-363-3p89.0608NM_016422
RNF141hsa-miR-446588.4954NM_016422
RNF141hsa-miR-452187.6144NM_016422
RNF141hsa-miR-891b86.9261NM_016422
RNF141hsa-miR-629-3p86.6589NM_016422
RNF141hsa-miR-32-3p86.2833NM_016422
RNF141hsa-miR-548at-5p86.2421NM_016422
RNF141hsa-miR-371a-5p86.0206NM_016422
RNF141hsa-miR-203a-3p85.6735NM_016422
RNF141hsa-miR-30a-3p83.1365NM_016422
RNF141hsa-miR-30d-3p83.1365NM_016422
RNF141hsa-miR-30e-3p83.1365NM_016422
RNF141hsa-miR-5187-3p83.1144NM_016422
RNF141hsa-miR-383-5p82.1184NM_016422
RNF141hsa-miR-93680.9626NM_016422
RNF141hsa-miR-590-3p80.1624NM_016422
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Motifs and transcription factors (TFs) regulating RNF141

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RNF141hdpi__ETV4ETV4 (directAnnotation).
RNF141taipale_tf_pairs__ELK1_TEF_NSCGGAWNTTACGTAAN_CAPELK1; TEF (directAnnotation).
RNF141taipale_tf_pairs__ETV2_HOXA2_NCCGGAAGTMATTA_CAP_reprETV2; HOXA2 (directAnnotation).
RNF141transfac_pro__M06156ZNF75D (directAnnotation).
RNF141taipale_tf_pairs__HOXB2_ELF1_SMGGAAGTMRTTA_CAPELF1; HOXB2 (directAnnotation).
RNF141hdpi__TP73TP73 (directAnnotation).
RNF141taipale_tf_pairs__ERF_HES7_NCCGGAANNNNNNCACGYGNN_CAP_reprERF; HES7 (directAnnotation).
RNF141metacluster_19.7GMEB1; GMEB2 (inferredBy_Orthology).
RNF141metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
RNF141dbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
RNF141taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
RNF141taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
RNF141jaspar__MA1122.1TFDP1 (directAnnotation).
RNF141metacluster_135.11NR2C2 (directAnnotation).
RNF141metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
RNF141tfdimers__MD00038TFAP2C (directAnnotation).
RNF141metacluster_144.3ZNF704; ZNF704 (directAnnotation).
RNF141metacluster_7.13ZFX (directAnnotation).
RNF141kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
RNF141cisbp__M00968MTF2 (directAnnotation).
RNF141metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
RNF141metacluster_160.20JUND; PRDM15 (directAnnotation).
RNF141cisbp__M00341PAX6 (directAnnotation).
RNF141metacluster_198.3ZFP64 (directAnnotation).
RNF141metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
RNF141metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
RNF141jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
RNF141metacluster_61.1DEAF1; DEAF1 (directAnnotation).
RNF141cisbp__M00788ZFY (inferredBy_Orthology).
RNF141kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
RNF141metacluster_175.1ZNF283 (directAnnotation).
RNF141hdpi__ZNF304ZNF304 (directAnnotation).
RNF141transfac_pro__M02844BCL6B (inferredBy_Orthology).
RNF141metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
RNF141metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
RNF141transfac_pro__M01199TRIM28 (directAnnotation).
RNF141kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
RNF141metacluster_151.2ZNF23 (directAnnotation).
RNF141transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
RNF141transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
RNF141transfac_pro__M03806ZBTB7C (directAnnotation).
RNF141transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."