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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RIMS2

Summary for RIMS2

Gene informationGene symbol

RIMS2

Ensembl ID

ENSG00000176406

Entrez ID

9699

Gene nameregulating synaptic membrane exocytosis 2
SynonymsKIAA0751|OBOE|RAB3IP3|RIM2
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: RIMS2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells0.6047020.00e+00

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Expression of RIMS2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RIMS2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating RIMS2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RIMS2hsa-miR-313399.7144NM_001100117
RIMS2hsa-miR-186-5p99.6942NM_001100117
RIMS2hsa-miR-548aw99.6358NM_001100117
RIMS2hsa-miR-5692a98.5128NM_001100117
RIMS2hsa-miR-548c-3p98.4859NM_001100117
RIMS2hsa-miR-6780a-3p97.6627NM_001100117
RIMS2hsa-miR-3059-5p97.5717NM_001100117
RIMS2hsa-miR-548f-5p96.9962NM_001100117
RIMS2hsa-miR-889-5p96.4582NM_001100117
RIMS2hsa-miR-1468-3p96.2951NM_001100117
RIMS2hsa-miR-548g-5p96.2799NM_001100117
RIMS2hsa-miR-548x-5p96.2799NM_001100117
RIMS2hsa-miR-548aj-5p96.2799NM_001100117
RIMS2hsa-miR-211-5p96.0677NM_001100117
RIMS2hsa-miR-204-5p96.0677NM_001100117
RIMS2hsa-miR-4684-3p95.825NM_001100117
RIMS2hsa-miR-50795.747NM_001100117
RIMS2hsa-miR-561-3p95.3844NM_001282882
RIMS2hsa-miR-124895.2224NM_001100117
RIMS2hsa-miR-391095.1888NM_001100117
RIMS2hsa-miR-55794.7222NM_001100117
RIMS2hsa-miR-217-5p94.6303NM_001282882
RIMS2hsa-miR-133a-5p94.5672NM_001100117
RIMS2hsa-miR-568093.9903NM_001100117
RIMS2hsa-miR-7111-3p93.8913NM_001100117
RIMS2hsa-miR-6881-3p93.8913NM_001100117
RIMS2hsa-miR-5692c93.832NM_001100117
RIMS2hsa-miR-5692b93.832NM_001100117
RIMS2hsa-miR-138-5p93.773NM_001100117
RIMS2hsa-miR-6807-3p93.641NM_001282882
RIMS2hsa-miR-364693.631NM_001282882
RIMS2hsa-miR-62393.4597NM_001100117
RIMS2hsa-miR-5581-3p93.4159NM_001100117
RIMS2hsa-miR-3622a-3p93.2181NM_001100117
RIMS2hsa-miR-3622b-3p93.2181NM_001100117
RIMS2hsa-miR-60792.8736NM_001100117
RIMS2hsa-miR-129392.5152NM_001282882
RIMS2hsa-miR-316792.3748NM_001100117
RIMS2hsa-miR-450b-5p92.1575NM_001100117
RIMS2hsa-miR-3158-3p91.9119NM_001100117
RIMS2hsa-miR-876-5p91.4787NM_001100117
RIMS2hsa-miR-448391.4473NM_001282882
RIMS2hsa-miR-431191.418NM_001282882
RIMS2hsa-miR-7114-5p91.3872NM_001100117
RIMS2hsa-miR-548av-3p91.0848NM_001282882
RIMS2hsa-miR-34690.6437NM_001100117
RIMS2hsa-let-7c-3p90.3054NM_001100117
RIMS2hsa-miR-5003-3p90.2613NM_001100117
RIMS2hsa-miR-6768-5p90.135NM_001100117
RIMS2hsa-miR-4632-5p89.8022NM_001100117
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Motifs and transcription factors (TFs) regulating RIMS2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RIMS2metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
RIMS2taipale_tf_pairs__GCM1_SPDEF_RTRSKGGCGGANNNNNNATCCNNN_CAP_reprGCM1; SPDEF (directAnnotation).
RIMS2transfac_pro__M00652NRF1 (directAnnotation).
RIMS2transfac_pro__M01298MECP2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."