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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RCOR3

Summary for RCOR3

Gene informationGene symbol

RCOR3

Ensembl ID

ENSG00000117625

Entrez ID

55758

Gene nameREST corepressor 3
SynonymsFLJ10876
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: RCOR3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.4499940.00e+00

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Expression of RCOR3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RCOR3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating RCOR3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RCOR3hsa-miR-95-5p94.9592NM_001136224
RCOR3hsa-miR-141-3p94.02NM_001136225
RCOR3hsa-miR-200a-3p94.02NM_001136225
RCOR3hsa-miR-128-3p93.5611NM_001136224
RCOR3hsa-miR-216a-3p93.5611NM_001136224
RCOR3hsa-miR-580-5p93.0472NM_001136223
RCOR3hsa-miR-548ap-3p92.9833NM_001136225
RCOR3hsa-miR-548aa92.9833NM_001136225
RCOR3hsa-miR-548t-3p92.9833NM_001136225
RCOR3hsa-miR-5197-3p92.837NM_001136224
RCOR3hsa-miR-3681-3p92.7682NM_001136224
RCOR3hsa-miR-1468-3p92.6042NM_001136223
RCOR3hsa-miR-302f91.1087NM_001136224
RCOR3hsa-miR-548c-3p89.6677NM_001136224
RCOR3hsa-miR-4477a88.6714NM_001136223
RCOR3hsa-miR-316388.4584NM_001136224
RCOR3hsa-miR-568488.0054NM_001136223
RCOR3hsa-miR-500a-5p87.743NM_001136224
RCOR3hsa-miR-3120-5p87.2259NM_001136224
RCOR3hsa-miR-3160-5p86.945NM_001136224
RCOR3hsa-miR-6732-3p86.5231NM_001136223
RCOR3hsa-miR-6885-3p86.466NM_001136223
RCOR3hsa-miR-7159-5p86.135NM_001136223
RCOR3hsa-miR-311985.3383NM_001136224
RCOR3hsa-miR-3065-5p85.3273NM_001136223
RCOR3hsa-miR-380-3p84.8584NM_001136223
RCOR3hsa-miR-1251-3p84.8006NM_001136224
RCOR3hsa-miR-4804-3p84.4417NM_001136225
RCOR3hsa-miR-366284.3831NM_001136224
RCOR3hsa-miR-56783.7171NM_001136223
RCOR3hsa-miR-520f-3p83.5567NM_001136224
RCOR3hsa-miR-10525-3p83.3471NM_001136225
RCOR3hsa-miR-675-3p82.6053NM_001136223
RCOR3hsa-miR-590-3p82.548NM_001136224
RCOR3hsa-miR-7856-5p82.1653NM_001136223
RCOR3hsa-miR-888-3p82.1564NM_001136223
RCOR3hsa-miR-4699-3p82.1408NM_001136224
RCOR3hsa-miR-892a81.9885NM_001136224
RCOR3hsa-miR-497-3p81.68NM_001136224
RCOR3hsa-miR-313381.5757NM_001136224
RCOR3hsa-miR-4477b81.1114NM_001136223
RCOR3hsa-miR-499a-5p80.9623NM_001136225
RCOR3hsa-miR-4704-5p80.4149NM_001136223
RCOR3hsa-miR-27a-3p80.1449NM_001136224
RCOR3hsa-miR-27b-3p80.1449NM_001136224
RCOR3hsa-miR-998580.1449NM_001136224
RCOR3hsa-miR-561-5p80.0603NM_001136223
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Motifs and transcription factors (TFs) regulating RCOR3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RCOR3transfac_pro__M02089E2F3 (directAnnotation).
RCOR3transfac_pro__M02898SMAD3 (directAnnotation).
RCOR3metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
RCOR3metacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
RCOR3metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
RCOR3transfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
RCOR3hdpi__HIP2UBE2K (directAnnotation).
RCOR3hdpi__NRLNRL (directAnnotation).
RCOR3transfac_pro__M00430E2F1 (directAnnotation).
RCOR3homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
RCOR3homer__NANTGCSGCA_Zfp57ZFP57 (directAnnotation).
RCOR3transfac_pro__M07329SP7 (directAnnotation).
RCOR3metacluster_197.3E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F2; E2F2; E2F2; E2F2; E2F2; E2F3; E2F3; E2F3; E2F3; E2F3; E2F3; E2F3; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F5; E2F5; E2F5; E2F5; E2F6; E2F7; E2F7; E2F7; RB1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP2; TFDP2 (directAnnotation).
RCOR3transfac_pro__M07397ZNF148 (directAnnotation).
RCOR3transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
RCOR3metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
RCOR3cisbp__M07938E2F1 (directAnnotation).
RCOR3metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
RCOR3hocomoco__EGR4_HUMAN.H11MO.0.DEGR4 (directAnnotation).
RCOR3metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
RCOR3transfac_pro__M07436WT1 (directAnnotation).
RCOR3metacluster_3.14WT1; WT1 (directAnnotation).
RCOR3transfac_pro__M01090SMAD9 (inferredBy_Orthology).
RCOR3transfac_pro__M01837KLF11 (directAnnotation).
RCOR3hdpi__TP73TP73 (directAnnotation).
RCOR3transfac_pro__M02844BCL6B (inferredBy_Orthology).
RCOR3transfac_pro__M07310SP5 (directAnnotation).
RCOR3taipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
RCOR3metacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
RCOR3transfac_pro__M04817ZBTB33 (directAnnotation).
RCOR3jaspar__MA0748.2YY2 (directAnnotation).
RCOR3swissregulon__hs__KLF6KLF6 (directAnnotation).
RCOR3metacluster_7.13ZFX (directAnnotation).
RCOR3metacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
RCOR3transfac_pro__M00716ZBTB14 (directAnnotation).
RCOR3metacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
RCOR3jaspar__MA1122.1TFDP1 (directAnnotation).
RCOR3metacluster_3.4SP1; SP2; SP2; SP3 (directAnnotation).
RCOR3cisbp__M00968MTF2 (directAnnotation).
RCOR3metacluster_163.2ZNF682 (directAnnotation).
RCOR3metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
RCOR3transfac_pro__M04916TAF1 (directAnnotation).
RCOR3transfac_pro__M00938E2F1 (directAnnotation).
RCOR3taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
RCOR3transfac_pro__M02090E2F4 (directAnnotation).
RCOR3kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
RCOR3hocomoco__PROX1_HUMAN.H11MO.0.DPROX1 (directAnnotation).
RCOR3swissregulon__hs__CHD1CHD1 (directAnnotation).
RCOR3transfac_pro__M01303SP1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."