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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RCC2

Summary for RCC2

Gene informationGene symbol

RCC2

Ensembl ID

ENSG00000281540

Entrez ID

55920

Gene nameregulator of chromosome condensation 2
SynonymsTD-60
Gene typeprotein_coding
UniProtAcc

Q9P258


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Dataset with differentially expressed gene: RCC2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.4110761.21e-32

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.2774880.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.3984820.00e+00

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Expression of RCC2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RCC2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating RCC2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RCC2hsa-miR-5011-5p98.056NM_001136204
RCC2hsa-miR-190a-3p95.9065NM_001136204
RCC2hsa-miR-330-3p94.3608NM_001136204
RCC2hsa-miR-10527-5p93.7498NM_001136204
RCC2hsa-miR-397892.9465NM_001136204
RCC2hsa-miR-5584-5p92.2371NM_001136204
RCC2hsa-miR-4668-5p90.6249NM_001136204
RCC2hsa-miR-3145-5p89.4261NM_001136204
RCC2hsa-miR-196a-5p89.1448NM_001136204
RCC2hsa-miR-196b-5p89.1448NM_001136204
RCC2hsa-miR-182588.7639NM_001136204
RCC2hsa-miR-6892-5p88.6593NM_001136204
RCC2hsa-miR-153-5p87.4928NM_001136204
RCC2hsa-miR-506-5p86.7212NM_001136204
RCC2hsa-miR-548m86.6609NM_001136204
RCC2hsa-miR-7850-5p86.57NM_001136204
RCC2hsa-miR-444186.5346NM_001136204
RCC2hsa-miR-5582-3p85.9541NM_001136204
RCC2hsa-miR-4786-5p83.6962NM_001136204
RCC2hsa-miR-6737-5p83.6459NM_001136204
RCC2hsa-miR-6819-5p83.6459NM_001136204
RCC2hsa-miR-569583.1842NM_001136204
RCC2hsa-miR-3622a-3p82.6696NM_001136204
RCC2hsa-miR-3622b-3p82.6696NM_001136204
RCC2hsa-miR-411-5p82.128NM_001136204
RCC2hsa-miR-1911-3p81.7762NM_001136204
RCC2hsa-miR-60881.7004NM_001136204
RCC2hsa-miR-6812-5p81.1325NM_001136204
RCC2hsa-miR-498-3p80.8874NM_001136204
RCC2hsa-miR-427080.6546NM_001136204
RCC2hsa-miR-427280.5195NM_001136204
RCC2hsa-miR-6885-3p80.3984NM_001136204
RCC2hsa-miR-442280.1183NM_001136204
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Motifs and transcription factors (TFs) regulating RCC2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RCC2transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
RCC2transfac_pro__M07397ZNF148 (directAnnotation).
RCC2metacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
RCC2metacluster_7.13ZFX (directAnnotation).
RCC2metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
RCC2homer__GGGGGGGG_MazMAZ (directAnnotation).
RCC2transfac_pro__M01175ZBTB7B (directAnnotation).
RCC2taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
RCC2tfdimers__MD00151CHURC1 (directAnnotation).
RCC2metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
RCC2transfac_pro__M01303SP1 (directAnnotation).
RCC2swissregulon__hs__CHD1CHD1 (directAnnotation).
RCC2transfac_pro__M02089E2F3 (directAnnotation).
RCC2metacluster_3.14WT1; WT1 (directAnnotation).
RCC2hocomoco__EGR4_HUMAN.H11MO.0.DEGR4 (directAnnotation).
RCC2cisbp__M07938E2F1 (directAnnotation).
RCC2transfac_pro__M07436WT1 (directAnnotation).
RCC2transfac_pro__M02281SP1 (directAnnotation).
RCC2kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
RCC2transfac_public__M00491PATZ1 (directAnnotation).
RCC2transfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
RCC2metacluster_144.8ZNF30; ZNF30 (directAnnotation).
RCC2metacluster_156.2ATF3; ATF4; ATF4; ATF4; ATF4; ATF4; ATF4; CEBPG; CEBPG; DDIT3; MYC (directAnnotation). ATF4; ATF4; ATF4; CEBPG; DDIT3 (inferredBy_Orthology).
RCC2metacluster_144.3ZNF704; ZNF704 (directAnnotation).
RCC2tfdimers__MD00154MZF1; SREBF1 (directAnnotation).
RCC2kznf__ZNF384_Schmitges2016_RCADEZNF384 (directAnnotation).
RCC2taipale_tf_pairs__ATF4_CEBPD_NGATGATGCAATNN_CAPATF4; CEBPD (directAnnotation).
RCC2metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
RCC2cisbp__M00249WT1 (directAnnotation).
RCC2kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
RCC2transfac_pro__M01122ZNF219 (directAnnotation).
RCC2metacluster_151.2ZNF23 (directAnnotation).
RCC2metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
RCC2kznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
RCC2metacluster_23.9GLIS1; GLIS3; GLIS3; ZNF575 (directAnnotation). GLIS2; GLIS2; GLIS3; ZNF575; ZXDA; ZXDA; ZXDA; ZXDA; ZXDB; ZXDB; ZXDB; ZXDB; ZXDC; ZXDC; ZXDC; ZXDC (inferredBy_Orthology).
RCC2transfac_pro__M01253CNOT3 (directAnnotation).
RCC2dbtfbs__ZSCAN30_HEK293_ENCSR768VNZ_merged_N1ZSCAN30 (directAnnotation).
RCC2metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
RCC2metacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
RCC2transfac_pro__M01199TRIM28 (directAnnotation).
RCC2tfdimers__MD00391KLF4 (directAnnotation).
RCC2cisbp__M00968MTF2 (directAnnotation).
RCC2transfac_pro__M12697ZNF142 (directAnnotation).
RCC2kznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
RCC2metacluster_144.5ZNF610; ZNF610; ZNF610 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."