DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene (This gene does not contain this module)

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target< (This gene does not contain this module)

Gene: RBMXL1

Summary for RBMXL1

Gene informationGene symbol

RBMXL1

Ensembl ID

ENSG00000213516

Entrez ID

494115

Gene nameRBMX like 1
SynonymsKAT3
Gene typeprotein_coding
UniProtAcc

Q96E39


Top

Dataset with differentially expressed gene: RBMXL1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.2834132.09e-12

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells0.3349613.20e-12

Top

Expression of RBMXL1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to RBMXL1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

Top

MicroRNAs (miRNA) regulating RBMXL1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RBMXL1hsa-miR-133b94.9053NM_001162536
RBMXL1hsa-miR-133a-3p94.9053NM_001162536
RBMXL1hsa-miR-144-3p94.8153NM_019610
RBMXL1hsa-miR-548t-5p94.751NM_019610
RBMXL1hsa-miR-548az-5p94.751NM_019610
RBMXL1hsa-miR-4684-3p92.1614NM_019610
RBMXL1hsa-miR-548aw91.0616NM_019610
RBMXL1hsa-miR-302c-5p89.2895NM_001162536
RBMXL1hsa-miR-6814-5p89.0098NM_019610
RBMXL1hsa-miR-6867-5p88.0989NM_019610
RBMXL1hsa-miR-29a-5p86.7249NM_001162536
RBMXL1hsa-miR-148a-5p86.6435NM_019610
RBMXL1hsa-miR-1229-5p86.4047NM_019610
RBMXL1hsa-miR-668-3p84.9269NM_019610
RBMXL1hsa-miR-6511a-5p84.8075NM_001162536
RBMXL1hsa-miR-1910-3p84.8075NM_001162536
RBMXL1hsa-miR-313383.6496NM_019610
RBMXL1hsa-miR-193b-3p83.1188NM_019610
RBMXL1hsa-miR-193a-3p83.1188NM_019610
RBMXL1hsa-miR-4659a-5p82.2897NM_019610
RBMXL1hsa-miR-1288-3p81.9169NM_019610
RBMXL1hsa-miR-4659b-5p81.2774NM_019610
RBMXL1hsa-miR-3529-3p80.8009NM_001162536
RBMXL1hsa-miR-320d80.4417NM_019610
RBMXL1hsa-miR-442980.4417NM_019610
RBMXL1hsa-miR-320a-3p80.4417NM_019610
RBMXL1hsa-miR-320b80.4417NM_019610
RBMXL1hsa-miR-320c80.4417NM_019610
RBMXL1hsa-miR-153-5p80.0457NM_019610
Page: 1

Top

Motifs and transcription factors (TFs) regulating RBMXL1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RBMXL1dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
RBMXL1taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
RBMXL1metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
RBMXL1taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
RBMXL1hdpi__TP73TP73 (directAnnotation).
RBMXL1jaspar__MA1483.2ELF2 (directAnnotation).
RBMXL1metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
RBMXL1transfac_pro__M04826EP300 (directAnnotation).
RBMXL1transfac_pro__M04862NRF1 (directAnnotation).
RBMXL1taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
RBMXL1taipale_tf_pairs__FOXO1_ETV1_RCCGGAWGTKKN_CAPETV1; FOXO1 (directAnnotation).
RBMXL1jaspar__MA0748.2YY2 (directAnnotation).
RBMXL1transfac_pro__M00492STAT1 (directAnnotation).
Page: 1

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."