DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene (This gene does not contain this module)

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target< (This gene does not contain this module)

Gene: RBFOX2

Summary for RBFOX2

Gene informationGene symbol

RBFOX2

Ensembl ID

ENSG00000277564

Entrez ID

23543

Gene nameRNA binding fox-1 homolog 2
SynonymsFOX-2|HNRBP2|HRNBP2|RBM9
Gene typeprotein_coding
UniProtAcc

O43251


Top

Dataset with differentially expressed gene: RBFOX2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells1.00831.09e-12

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.4540550.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.387250.00e+00

Top

Expression of RBFOX2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to RBFOX2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

Top

MicroRNAs (miRNA) regulating RBFOX2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RBFOX2hsa-miR-130a-5p98.2183NM_014309
RBFOX2hsa-miR-211-3p98.1388NM_001031695
RBFOX2hsa-miR-806897.996NM_014309
RBFOX2hsa-miR-518a-5p97.9081NM_014309
RBFOX2hsa-miR-52797.9081NM_014309
RBFOX2hsa-miR-4728-5p97.7238NM_001031695
RBFOX2hsa-miR-548an97.2093NM_001031695
RBFOX2hsa-miR-6785-5p97.0474NM_001031695
RBFOX2hsa-miR-186-5p96.8656NM_001031695
RBFOX2hsa-miR-509396.7571NM_001031695
RBFOX2hsa-miR-6752-3p96.555NM_001031695
RBFOX2hsa-miR-314896.116NM_014309
RBFOX2hsa-miR-202-3p95.4202NM_001031695
RBFOX2hsa-miR-149-3p95.3114NM_001031695
RBFOX2hsa-miR-6883-5p95.3114NM_001031695
RBFOX2hsa-miR-998693.8397NM_014309
RBFOX2hsa-miR-129493.8397NM_014309
RBFOX2hsa-miR-3059-5p93.5847NM_014309
RBFOX2hsa-miR-508-3p92.932NM_001031695
RBFOX2hsa-miR-6873-3p92.8773NM_014309
RBFOX2hsa-miR-450092.7697NM_001031695
RBFOX2hsa-miR-1212892.7368NM_001031695
RBFOX2hsa-miR-3065-3p92.6465NM_001031695
RBFOX2hsa-miR-877-3p92.6328NM_001031695
RBFOX2hsa-miR-1213692.3147NM_001031695
RBFOX2hsa-miR-371491.223NM_014309
RBFOX2hsa-miR-548n91.2047NM_001031695
RBFOX2hsa-let-7e-5p90.776NM_001031695
RBFOX2hsa-let-7f-5p90.776NM_001031695
RBFOX2hsa-let-7g-5p90.776NM_001031695
RBFOX2hsa-let-7a-5p90.776NM_001031695
RBFOX2hsa-let-7i-5p90.776NM_001031695
RBFOX2hsa-miR-98-5p90.776NM_001031695
RBFOX2hsa-let-7c-5p90.776NM_001031695
RBFOX2hsa-let-7b-5p90.776NM_001031695
RBFOX2hsa-miR-4789-5p90.5753NM_014309
RBFOX2hsa-miR-140-3p89.7329NM_001031695
RBFOX2hsa-let-7d-5p89.0555NM_001031695
RBFOX2hsa-miR-445889.0555NM_001031695
RBFOX2hsa-miR-6511a-5p88.7804NM_014309
RBFOX2hsa-miR-1910-3p88.7804NM_014309
RBFOX2hsa-miR-324-5p88.3348NM_001031695
RBFOX2hsa-miR-6833-3p88.1496NM_014309
RBFOX2hsa-miR-202-5p88.0078NM_001031695
RBFOX2hsa-miR-3192-3p87.9873NM_001031695
RBFOX2hsa-miR-42987.9838NM_001031695
RBFOX2hsa-miR-200b-3p87.9838NM_001031695
RBFOX2hsa-miR-200c-3p87.9838NM_001031695
RBFOX2hsa-miR-391587.7562NM_014309
RBFOX2hsa-miR-317587.4124NM_014309
Page: 1 2

Top

Motifs and transcription factors (TFs) regulating RBFOX2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RBFOX2taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
RBFOX2metacluster_151.2ZNF23 (directAnnotation).
RBFOX2metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
RBFOX2transfac_pro__M05479ZNF580 (directAnnotation).
RBFOX2metacluster_144.3ZNF704; ZNF704 (directAnnotation).
RBFOX2hocomoco__KLF13_HUMAN.H11MO.0.DKLF13 (directAnnotation).
RBFOX2jaspar__MA0079.5SP1 (directAnnotation).
RBFOX2metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
RBFOX2transfac_pro__M04950EGR1 (directAnnotation).
RBFOX2metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
RBFOX2metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
RBFOX2taipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
RBFOX2metacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
RBFOX2transfac_pro__M00652NRF1 (directAnnotation).
RBFOX2transfac_pro__M04866HDAC2 (directAnnotation).
RBFOX2jaspar__MA1122.1TFDP1 (directAnnotation).
RBFOX2metacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
RBFOX2swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
RBFOX2metacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
RBFOX2kznf__ZBTB14_Schmitges2016_RCADEZBTB14 (directAnnotation).
RBFOX2transfac_pro__M04617ZBTB7A (directAnnotation).
RBFOX2metacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
RBFOX2taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
RBFOX2taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
RBFOX2transfac_pro__M07387ZBTB7A (directAnnotation).
RBFOX2transfac_pro__M07436WT1 (directAnnotation).
RBFOX2transfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
RBFOX2transfac_pro__M00716ZBTB14 (directAnnotation).
RBFOX2swissregulon__hs__CHD1CHD1 (directAnnotation).
RBFOX2taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
RBFOX2transfac_pro__M03876ZBTB33 (directAnnotation).
RBFOX2metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
RBFOX2metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
RBFOX2kznf__ZNF441_Imbeault2017_RP_RCADEZNF441 (directAnnotation).
RBFOX2transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
RBFOX2metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
Page: 1

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."