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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RAP2C

Summary for RAP2C

Gene informationGene symbol

RAP2C

Ensembl ID

ENSG00000123728

Entrez ID

57826

Gene nameRAP2C, member of RAS oncogene family
SynonymsDKFZp313B211
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: RAP2C

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.2547151.36e-10

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.2620691.01e-16

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Expression of RAP2C in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RAP2C

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating RAP2C

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RAP2Chsa-miR-524-5p99.7238NM_001271186
RAP2Chsa-miR-520d-5p99.7238NM_001271186
RAP2Chsa-miR-551b-5p99.5791NM_001271186
RAP2Chsa-miR-454-3p98.9644NM_001271186
RAP2Chsa-miR-130a-3p98.8954NM_001271186
RAP2Chsa-miR-301b-3p98.8625NM_001271186
RAP2Chsa-miR-366698.8625NM_001271186
RAP2Chsa-miR-429598.8625NM_001271186
RAP2Chsa-miR-301a-3p98.8625NM_001271186
RAP2Chsa-miR-130b-3p98.8625NM_001271186
RAP2Chsa-miR-1537-5p98.7046NM_001271186
RAP2Chsa-miR-548an98.1639NM_001271186
RAP2Chsa-miR-451197.9086NM_001271186
RAP2Chsa-miR-145-3p97.7673NM_001271186
RAP2Chsa-miR-19a-3p96.0384NM_001271186
RAP2Chsa-miR-19b-3p96.0384NM_001271186
RAP2Chsa-miR-200c-3p95.7287NM_001271186
RAP2Chsa-miR-42995.7287NM_001271186
RAP2Chsa-miR-200b-3p95.7287NM_001271186
RAP2Chsa-miR-469895.4917NM_001271186
RAP2Chsa-miR-101-3p95.3393NM_001271186
RAP2Chsa-miR-129795.2884NM_001271186
RAP2Chsa-miR-806795.2797NM_001271186
RAP2Chsa-miR-6890-3p95.2348NM_001271186
RAP2Chsa-miR-6508-5p95.2331NM_001271186
RAP2Chsa-miR-6832-3p95.0998NM_001271186
RAP2Chsa-miR-30d-5p95.0203NM_001271186
RAP2Chsa-miR-30e-5p95.0203NM_001271186
RAP2Chsa-miR-30b-5p95.0203NM_001271186
RAP2Chsa-miR-30a-5p95.0203NM_001271186
RAP2Chsa-miR-30c-5p95.0203NM_001271186
RAP2Chsa-miR-6869-5p94.5896NM_001271186
RAP2Chsa-miR-548e-5p94.5786NM_001271186
RAP2Chsa-miR-181b-2-3p94.5357NM_001271186
RAP2Chsa-miR-181b-3p94.5357NM_001271186
RAP2Chsa-miR-442094.5357NM_001271186
RAP2Chsa-miR-1252-3p94.4481NM_001271186
RAP2Chsa-miR-651-3p94.2479NM_001271186
RAP2Chsa-miR-892c-5p93.9569NM_001271186
RAP2Chsa-miR-548aw93.8303NM_001271186
RAP2Chsa-miR-463593.6825NM_001271186
RAP2Chsa-miR-26a-5p93.5492NM_001271186
RAP2Chsa-miR-26b-5p93.5492NM_001271186
RAP2Chsa-miR-4762-5p92.9017NM_001271186
RAP2Chsa-miR-20a-5p92.6285NM_001271186
RAP2Chsa-miR-106b-5p92.6285NM_001271186
RAP2Chsa-miR-446592.5802NM_001271186
RAP2Chsa-miR-60792.4113NM_001271186
RAP2Chsa-miR-17-5p92.3686NM_001271186
RAP2Chsa-miR-526b-3p92.3686NM_001271186
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Motifs and transcription factors (TFs) regulating RAP2C

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RAP2Ctaipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
RAP2Cmetacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
RAP2Cmetacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
RAP2Cmetacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
RAP2Ctaipale_tf_pairs__FOXO1_ELK3_RCCGGAWGTKKW_CAPELK3; FOXO1 (directAnnotation).
RAP2Ctaipale_tf_pairs__ETV5_HOXA2_RSCGGWAATKR_CAPETV5; HOXA2 (directAnnotation).
RAP2Cjaspar__MA1483.2ELF2 (directAnnotation).
RAP2Cmetacluster_166.2ELK4; ETS1; ETS1; ETV1; ETV3; ETV4; ETV5; ETV7 (directAnnotation). GABPA (inferredBy_Orthology).
RAP2Ctransfac_pro__M04826EP300 (directAnnotation).
RAP2Ctaipale_tf_pairs__ELK1_HOXA1_RCCGGAAGTAATTA_HTELK1; HOXA1 (directAnnotation).
RAP2Cmetacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
RAP2Cswissregulon__hs__ELF2ELF2 (directAnnotation).
RAP2Ctaipale_tf_pairs__ELK1_EOMES_TNRCACCGGAAGN_CAPELK1; EOMES (directAnnotation).
RAP2Chdpi__ETV4ETV4 (directAnnotation).
RAP2Ccisbp__M02645ETS1 (directAnnotation).
RAP2Ctaipale_tf_pairs__ETV5_EVX1_RSCGGWAATKR_CAPETV5; EVX1 (directAnnotation).
RAP2Ctaipale_tf_pairs__ELK1_TBX21_TNRCACCGGAAGNN_CAP_reprELK1; TBX21 (directAnnotation).
RAP2Ccisbp__M08198ELF1 (directAnnotation).
RAP2Ctaipale_tf_pairs__ERF_FOXI1_RSCGGATGTTKWN_CAP_reprERF; FOXI1 (directAnnotation).
RAP2Ctaipale_tf_pairs__ETV2_RFX5_NNNTTCCGSNNNNGCAACNN_CAP_reprETV2; RFX5 (directAnnotation).
RAP2Cjaspar__MA1708.1ETV7 (directAnnotation).
RAP2Ctaipale_tf_pairs__ETV2_FOXO6_RCCGGATGTTKWN_CAPETV2; FOXO6 (directAnnotation).
RAP2Ctaipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
RAP2Ctaipale_tf_pairs__FOXO1_ETV4_RCCGGAWGTKKN_CAPETV4; FOXO1 (directAnnotation).
RAP2Chdpi__TP73TP73 (directAnnotation).
RAP2Chdpi__ELF2ELF2 (directAnnotation).
RAP2Cswissregulon__hs__ELK1ELK1 (directAnnotation).
RAP2Ctaipale_tf_pairs__ETV2_DRGX_RSCGGAWRYATTA_CAP_reprDRGX; ETV2 (directAnnotation).
RAP2Cmetacluster_183.4ETS1 (inferredBy_Orthology).
RAP2Ctransfac_pro__M01298MECP2 (directAnnotation).
RAP2Ctaipale_tf_pairs__HOXB2_ELK3_RSCGGAAGTMRTTA_CAPELK3; HOXB2 (directAnnotation).
RAP2Cmetacluster_35.5ELF1; ELF2; ELF3; ELF3; ELK1; ELK4; ERF; ERG; ETS1; ETS1; ETS2; ETV7; ETV7; FLI1; FLI1 (directAnnotation).
RAP2Chdpi__FLI1FLI1 (directAnnotation).
RAP2Ctaipale_tf_pairs__HOXB2_ETV4_ACCGGAAATGAN_CAPETV4; HOXB2 (directAnnotation).
RAP2Ctransfac_pro__M04862NRF1 (directAnnotation).
RAP2Ctransfac_pro__M00492STAT1 (directAnnotation).
RAP2Ctransfac_pro__M04848TAF1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."