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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene (This gene does not contain this module)

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RAD54B

Summary for RAD54B

Gene informationGene symbol

RAD54B

Ensembl ID

ENSG00000197275

Entrez ID

25788

Gene nameRAD54 homolog B
SynonymsRDH54
Gene typeprotein_coding
UniProtAcc

Q9Y620


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Dataset with differentially expressed gene: RAD54B

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells-1.570422.14e-06

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Expression of RAD54B in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RAD54B

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating RAD54B

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RAD54Bhsa-miR-58798.9094NM_001205262
RAD54Bhsa-miR-316398.6716NM_001205262
RAD54Bhsa-miR-139-5p94.9987NM_001205262
RAD54Bhsa-miR-130594.73NM_012415
RAD54Bhsa-miR-548e-5p93.479NM_001205262
RAD54Bhsa-miR-506-5p92.9937NM_001205262
RAD54Bhsa-miR-365892.5845NM_001205262
RAD54Bhsa-miR-426292.0957NM_001205262
RAD54Bhsa-miR-477592.0417NM_012415
RAD54Bhsa-miR-144-3p91.6467NM_001205262
RAD54Bhsa-miR-942-5p91.2696NM_001205262
RAD54Bhsa-miR-1022690.5546NM_001205262
RAD54Bhsa-miR-383-5p90.223NM_001205262
RAD54Bhsa-miR-551b-5p89.9024NM_001205262
RAD54Bhsa-miR-371b-5p89.585NM_001205262
RAD54Bhsa-miR-373-5p89.585NM_001205262
RAD54Bhsa-miR-616-5p89.585NM_001205262
RAD54Bhsa-miR-5584-5p89.4084NM_001205262
RAD54Bhsa-miR-335-3p89.3191NM_012415
RAD54Bhsa-miR-122b-3p88.8462NM_001205262
RAD54Bhsa-miR-21-3p88.8462NM_001205262
RAD54Bhsa-miR-64388.4256NM_001205262
RAD54Bhsa-miR-548aj-3p88.2984NM_001205262
RAD54Bhsa-miR-548x-3p88.2984NM_001205262
RAD54Bhsa-miR-6847-5p88.1027NM_001205262
RAD54Bhsa-miR-181a-5p87.9858NM_001205262
RAD54Bhsa-miR-181c-5p87.9858NM_001205262
RAD54Bhsa-miR-181d-5p87.9858NM_001205262
RAD54Bhsa-miR-181b-5p87.9858NM_001205262
RAD54Bhsa-miR-223-5p87.346NM_001205262
RAD54Bhsa-miR-513c-3p87.3272NM_001205262
RAD54Bhsa-miR-513a-3p87.3272NM_001205262
RAD54Bhsa-miR-4668-5p87.199NM_001205262
RAD54Bhsa-miR-314886.9814NM_001205262
RAD54Bhsa-miR-76586.8679NM_001205262
RAD54Bhsa-miR-3613-3p86.8398NM_001205262
RAD54Bhsa-miR-506-3p86.503NM_001205262
RAD54Bhsa-miR-124-3p86.503NM_001205262
RAD54Bhsa-miR-449585.5483NM_001205262
RAD54Bhsa-miR-548aq-3p85.5432NM_001205262
RAD54Bhsa-miR-548ae-3p85.5432NM_001205262
RAD54Bhsa-miR-1245a85.4155NM_001205262
RAD54Bhsa-miR-807985.4155NM_001205262
RAD54Bhsa-miR-313384.3426NM_001205262
RAD54Bhsa-miR-548j-3p84.2768NM_001205262
RAD54Bhsa-miR-548ah-3p84.2768NM_001205262
RAD54Bhsa-miR-548am-3p84.2768NM_001205262
RAD54Bhsa-miR-3606-3p83.5931NM_001205262
RAD54Bhsa-miR-11181-3p83.2747NM_001205262
RAD54Bhsa-miR-1-3p83.2165NM_012415
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Motifs and transcription factors (TFs) regulating RAD54B

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."