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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RAB3GAP2

Summary for RAB3GAP2

Gene informationGene symbol

RAB3GAP2

Ensembl ID

ENSG00000118873

Entrez ID

25782

Gene nameRAB3 GTPase activating non-catalytic protein subunit 2
SynonymsDKFZP434D245|KIAA0839|RAB3-GAP150|SPG69
Gene typeprotein_coding
UniProtAcc

Q9H2M9


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Dataset with differentially expressed gene: RAB3GAP2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.3609142.41e-26

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Expression of RAB3GAP2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RAB3GAP2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating RAB3GAP2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RAB3GAP2hsa-miR-1212498.3436NM_012414
RAB3GAP2hsa-miR-314897.1715NM_012414
RAB3GAP2hsa-miR-449697.1141NM_012414
RAB3GAP2hsa-miR-323a-3p95.2162NM_012414
RAB3GAP2hsa-miR-651-3p94.8955NM_012414
RAB3GAP2hsa-miR-450293.7096NM_012414
RAB3GAP2hsa-miR-428292.1718NM_012414
RAB3GAP2hsa-miR-4666a-3p90.802NM_012414
RAB3GAP2hsa-miR-3184-3p90.4481NM_012414
RAB3GAP2hsa-miR-374a-5p90.2792NM_012414
RAB3GAP2hsa-miR-374b-5p89.7383NM_012414
RAB3GAP2hsa-miR-7157-5p87.1933NM_012414
RAB3GAP2hsa-miR-4742-3p86.8597NM_012414
RAB3GAP2hsa-miR-182-5p86.3962NM_012414
RAB3GAP2hsa-miR-431086.2578NM_012414
RAB3GAP2hsa-let-7f-2-3p85.6875NM_012414
RAB3GAP2hsa-miR-1185-2-3p85.6875NM_012414
RAB3GAP2hsa-miR-1185-1-3p85.6875NM_012414
RAB3GAP2hsa-miR-6815-3p84.6421NM_012414
RAB3GAP2hsa-miR-548e-5p84.5262NM_012414
RAB3GAP2hsa-let-7f-1-3p84.4659NM_012414
RAB3GAP2hsa-let-7b-3p84.4659NM_012414
RAB3GAP2hsa-miR-98-3p84.4659NM_012414
RAB3GAP2hsa-let-7a-3p84.4659NM_012414
RAB3GAP2hsa-miR-3664-5p84.2596NM_012414
RAB3GAP2hsa-miR-183-3p83.8492NM_012414
RAB3GAP2hsa-miR-519382.3423NM_012414
RAB3GAP2hsa-miR-129482.2272NM_012414
RAB3GAP2hsa-miR-450082.0927NM_012414
RAB3GAP2hsa-miR-806881.7773NM_012414
RAB3GAP2hsa-miR-590-3p81.6526NM_012414
RAB3GAP2hsa-miR-449581.1285NM_012414
RAB3GAP2hsa-miR-5003-5p80.7836NM_012414
RAB3GAP2hsa-miR-89080.7568NM_012414
RAB3GAP2hsa-miR-998680.4578NM_012414
RAB3GAP2hsa-miR-205-3p80.2749NM_012414
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Motifs and transcription factors (TFs) regulating RAB3GAP2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RAB3GAP2dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."