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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene (This gene does not contain this module)

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RAB3C

Summary for RAB3C

Gene informationGene symbol

RAB3C

Ensembl ID

ENSG00000152932

Entrez ID

115827

Gene nameRAB3C, member RAS oncogene family
SynonymsNA
Gene typeprotein_coding
UniProtAcc

Q96E17


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Dataset with differentially expressed gene: RAB3C

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells-0.3069240.00e+00

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Expression of RAB3C in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RAB3C

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating RAB3C

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RAB3Chsa-miR-6867-5p99.9999NM_001317915
RAB3Chsa-miR-848599.5504NM_001317915
RAB3Chsa-miR-130598.6156NM_001317915
RAB3Chsa-miR-451798.4802NM_001317915
RAB3Chsa-miR-510-3p97.4045NM_001317915
RAB3Chsa-miR-313897.1519NM_001317915
RAB3Chsa-miR-2682-5p96.8654NM_001317915
RAB3Chsa-miR-34b-5p96.8529NM_001317915
RAB3Chsa-miR-449c-5p96.8529NM_001317915
RAB3Chsa-miR-125396.4478NM_001317915
RAB3Chsa-miR-442295.9694NM_001317915
RAB3Chsa-miR-316395.9608NM_001317915
RAB3Chsa-miR-427795.6207NM_001317915
RAB3Chsa-miR-4735-5p95.5651NM_001317915
RAB3Chsa-miR-428295.4664NM_001317915
RAB3Chsa-miR-659-5p95.3558NM_001317915
RAB3Chsa-miR-3680-3p95.195NM_001317915
RAB3Chsa-miR-96-5p94.6367NM_001317915
RAB3Chsa-miR-6868-3p94.5426NM_001317915
RAB3Chsa-miR-4699-5p94.3989NM_001317915
RAB3Chsa-miR-4776-3p94.2091NM_001317915
RAB3Chsa-miR-3605-5p94.0006NM_001317915
RAB3Chsa-miR-3064-3p93.7041NM_001317915
RAB3Chsa-miR-1213393.6486NM_001317915
RAB3Chsa-miR-1271-5p93.6486NM_001317915
RAB3Chsa-miR-365893.5364NM_001317915
RAB3Chsa-miR-4423-3p93.5161NM_001317915
RAB3Chsa-miR-6874-5p92.8776NM_001317915
RAB3Chsa-miR-367192.648NM_001317915
RAB3Chsa-miR-338-5p92.3479NM_001317915
RAB3Chsa-miR-6881-3p91.9317NM_001317915
RAB3Chsa-miR-4717-5p91.5746NM_001317915
RAB3Chsa-miR-6502-3p91.0754NM_001317915
RAB3Chsa-miR-6835-3p90.7974NM_001317915
RAB3Chsa-miR-92a-3p90.7169NM_001317915
RAB3Chsa-miR-32-5p90.7169NM_001317915
RAB3Chsa-miR-92b-3p90.7169NM_001317915
RAB3Chsa-miR-6847-5p90.3582NM_001317915
RAB3Chsa-miR-676-5p90.1083NM_001317915
RAB3Chsa-miR-3145-3p89.7781NM_001317915
RAB3Chsa-miR-10527-5p89.5792NM_001317915
RAB3Chsa-miR-4747-5p89.2207NM_001317915
RAB3Chsa-miR-5196-5p89.2207NM_001317915
RAB3Chsa-miR-5000-5p88.8634NM_001317915
RAB3Chsa-miR-364688.8146NM_001317915
RAB3Chsa-miR-363-3p88.7934NM_001317915
RAB3Chsa-miR-367-3p88.7934NM_001317915
RAB3Chsa-miR-25-3p88.7934NM_001317915
RAB3Chsa-miR-1211988.7607NM_001317915
RAB3Chsa-miR-6511a-5p88.6731NM_001317915
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Motifs and transcription factors (TFs) regulating RAB3C

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."