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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RAB27A

Summary for RAB27A

Gene informationGene symbol

RAB27A

Ensembl ID

ENSG00000069974

Entrez ID

5873

Gene nameRAB27A, member RAS oncogene family
SynonymsGS2|HsT18676|RAB27|RAM
Gene typeprotein_coding
UniProtAcc

P51159


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Dataset with differentially expressed gene: RAB27A

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells-1.050532.49e-02

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells0.320362.64e-16

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postCD8+ T cells-0.3190649.03e-09

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.4919910.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells0.2869715.80e-32

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells0.3332160.00e+00

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.4615850.00e+00

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.5936120.00e+00

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.4209752.83e-28

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Expression of RAB27A in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RAB27A

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

RAB27A

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating RAB27A

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RAB27Ahsa-miR-3121-3p98.4375NM_004580
RAB27Ahsa-miR-371497.7247NM_004580
RAB27Ahsa-miR-506-3p97.568NM_004580
RAB27Ahsa-miR-124-3p97.568NM_004580
RAB27Ahsa-miR-311895.88NM_004580
RAB27Ahsa-miR-134-5p95.88NM_004580
RAB27Ahsa-miR-391093.5043NM_004580
RAB27Ahsa-miR-494-3p92.1374NM_004580
RAB27Ahsa-miR-3156-5p91.5927NM_004580
RAB27Ahsa-miR-96-5p90.2596NM_004580
RAB27Ahsa-miR-1213389.9373NM_004580
RAB27Ahsa-miR-1271-5p89.9373NM_004580
RAB27Ahsa-miR-302c-5p85.7239NM_004580
RAB27Ahsa-miR-76085.7011NM_004580
RAB27Ahsa-miR-6839-5p85.6958NM_004580
RAB27Ahsa-miR-6504-3p85.1616NM_004580
RAB27Ahsa-miR-4699-3p85.0018NM_004580
RAB27Ahsa-miR-6732-5p84.9396NM_004580
RAB27Ahsa-miR-2355-3p84.4844NM_004580
RAB27Ahsa-miR-4781-5p83.6583NM_004580
RAB27Ahsa-miR-5187-3p82.6658NM_004580
RAB27Ahsa-miR-805781.5371NM_004580
RAB27Ahsa-miR-378j80.088NM_004580
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Motifs and transcription factors (TFs) regulating RAB27A

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RAB27Ametacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
RAB27Adbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
RAB27Ametacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
RAB27Atransfac_pro__M04826EP300 (directAnnotation).
RAB27Ametacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
RAB27Ataipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
RAB27Ataipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
RAB27Ajaspar__MA1122.1TFDP1 (directAnnotation).
RAB27Ametacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
RAB27Aswissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
RAB27Ataipale_tf_pairs__ETV5_HOXA2_RSCGGWAATKR_CAPETV5; HOXA2 (directAnnotation).
RAB27Ataipale_tf_pairs__HOXB2_ETV4_ACCGGAAATGAN_CAPETV4; HOXB2 (directAnnotation).
RAB27Ataipale_tf_pairs__ETV5_FOXI1_RSCGGATGTTGN_CAPETV5; FOXI1 (directAnnotation).
RAB27Ametacluster_55.5ZNF541 (directAnnotation).
RAB27Ataipale_tf_pairs__FOXO1_ETV4_RCCGGAWGTKKN_CAPETV4; FOXO1 (directAnnotation).
RAB27Ataipale_tf_pairs__FOXO1_ELK3_RCCGGAWGTKKW_CAPELK3; FOXO1 (directAnnotation).
RAB27Ataipale_tf_pairs__TEAD4_ERG_RSCGGAAATRCC_CAPERG; TEAD4 (directAnnotation).
RAB27Atransfac_pro__M06032ZNF727 (directAnnotation).
RAB27Ataipale_tf_pairs__ETV2_FOXI1_RNCGGAANNAAACA_CAP_reprETV2; FOXI1 (directAnnotation).
RAB27Ataipale_tf_pairs__ERF_TBX21_TMACACCGGAAG_CAPERF; TBX21 (directAnnotation).
RAB27Ataipale_tf_pairs__FOXO1_ELK1_RSCGGATGTTRTN_CAPELK1; FOXO1 (directAnnotation).
RAB27Ataipale_tf_pairs__ETV2_PITX1_RSCGGAANNNNNGGMTTAN_CAPETV2; PITX1 (directAnnotation).
RAB27Ahdpi__ELF2ELF2 (directAnnotation).
RAB27Aswissregulon__hs__ELK1ELK1 (directAnnotation).
RAB27Ametacluster_183.4ETS1 (inferredBy_Orthology).
RAB27Ataipale_tf_pairs__TEAD4_ETV1_RSCGGAAATRCM_CAPETV1; TEAD4 (directAnnotation).
RAB27Ataipale_tf_pairs__ETV5_EOMES_TNRCACCGGAWN_CAPEOMES; ETV5 (directAnnotation).
RAB27Ataipale_tf_pairs__ETV5_HOXB13_NNCGGANGNNNTWAA_CAPETV5; HOXB13 (directAnnotation).
RAB27Atransfac_pro__M05393ZBTB6 (inferredBy_Orthology).
RAB27Ahocomoco__BPTF_HUMAN.H11MO.0.DBPTF (directAnnotation).
RAB27Atfdimers__MD00521CHURC1; TAF6; TBP (directAnnotation).
RAB27Atfdimers__MD00425ELF5; SMAD4 (directAnnotation).
RAB27Ataipale_tf_pairs__ELK1_FOXI1_RSCGGAANNRTMAAYAN_CAP_reprELK1; FOXI1 (directAnnotation).
RAB27Ametacluster_85.1FOXH1; ZNF8; ZNF8 (directAnnotation).
RAB27Ametacluster_16.6SOX1; SOX14; SOX15; SOX18; SOX2; SOX2; SOX8; SRY (directAnnotation). SOX1; SOX10; SOX17; SOX3 (inferredBy_Orthology).
RAB27Atransfac_pro__M04622NR4A1 (directAnnotation).
RAB27Ametacluster_26.10SOX21; SOX7; SOX8 (directAnnotation).
RAB27Atransfac_pro__M05406ZNF781 (directAnnotation).
RAB27Atfdimers__MD00033ATF1; ATF2; ATF3; ATF4; ATF7; CREB1; CREM; YY1 (directAnnotation).
RAB27Ataipale_tf_pairs__GCM1_ETV7_NTNNNGGCGGAAGNNNTTCCNNN_CAP_reprETV7; GCM1 (directAnnotation).
RAB27Atransfac_pro__M12697ZNF142 (directAnnotation).
RAB27Atransfac_pro__M06173ZNF85 (directAnnotation).
RAB27Ajaspar__MA1650.1ZBTB14 (directAnnotation).
RAB27Atransfac_pro__M02089E2F3 (directAnnotation).
RAB27Atransfac_pro__M03806ZBTB7C (directAnnotation).
RAB27Ataipale_tf_pairs__GCM1_ETV4_RTGCGGGCGGAAGTR_CAPETV4; GCM1 (directAnnotation).
RAB27Atransfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
RAB27Atfdimers__MD00483ZBTB14 (directAnnotation).
RAB27Ataipale_tf_pairs__GCM1_ELK1_RTGCGGGCGGAAGTN_CAP_2ELK1; GCM1 (directAnnotation).
RAB27Atransfac_pro__M06085ZNF26 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."