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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: PTEN

Summary for PTEN

Gene informationGene symbol

PTEN

Ensembl ID

ENSG00000284792

Entrez ID

5728

Gene namephosphatase and tensin homolog
SynonymsBZS|MHAM|MMAC1|PTEN1|TEP1
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: PTEN

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostB cells-0.2595096.89e-12

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postNeutrophils-0.497144.42e-12

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.2818390.00e+00

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.304460.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells-0.4549770.00e+00

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Expression of PTEN in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PTEN

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

PTEN

Regulation by the Disease Microenvironment

PTEN

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating PTEN

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PTENhsa-miR-129799.7644NM_001304718
PTENhsa-miR-5011-5p99.7623NM_001304718
PTENhsa-miR-26b-5p99.4595NM_001304718
PTENhsa-miR-26a-5p99.3778NM_001304718
PTENhsa-miR-446599.0101NM_001304718
PTENhsa-miR-5692b98.9883NM_000314
PTENhsa-miR-5692c98.9883NM_000314
PTENhsa-miR-23b-3p98.9661NM_001304718
PTENhsa-miR-23a-3p98.9661NM_001304718
PTENhsa-miR-23c98.9661NM_001304718
PTENhsa-miR-477598.027NM_001304718
PTENhsa-miR-1277-5p97.4588NM_000314
PTENhsa-miR-494-3p97.3574NM_000314
PTENhsa-miR-190a-3p97.2042NM_001304718
PTENhsa-miR-513c-3p97.1897NM_001304718
PTENhsa-miR-513a-3p97.1897NM_001304718
PTENhsa-miR-29b-3p97.0038NM_001304718
PTENhsa-miR-29c-3p97.0038NM_001304718
PTENhsa-miR-29a-3p97.0038NM_001304718
PTENhsa-miR-486-5p96.7957NM_001304718
PTENhsa-miR-848596.3841NM_001304718
PTENhsa-miR-3944-5p96.2057NM_001304718
PTENhsa-miR-32-5p96.1906NM_001304718
PTENhsa-miR-92a-3p96.1906NM_001304718
PTENhsa-miR-92b-3p96.1906NM_001304718
PTENhsa-miR-373-5p96.1862NM_000314
PTENhsa-miR-616-5p96.1862NM_000314
PTENhsa-miR-371b-5p96.1862NM_000314
PTENhsa-miR-30a-3p95.8803NM_001304718
PTENhsa-miR-30d-3p95.8803NM_001304718
PTENhsa-miR-30e-3p95.8803NM_001304718
PTENhsa-miR-3606-3p95.6273NM_001304718
PTENhsa-miR-188-5p94.9536NM_001304718
PTENhsa-miR-367-3p94.7654NM_001304718
PTENhsa-miR-25-3p94.7654NM_001304718
PTENhsa-miR-363-3p94.7654NM_001304718
PTENhsa-miR-314894.3267NM_000314
PTENhsa-miR-4482-3p93.8825NM_000314
PTENhsa-miR-3064-3p93.8616NM_001304718
PTENhsa-miR-590-3p93.8314NM_001304718
PTENhsa-miR-6866-3p93.8146NM_001304718
PTENhsa-miR-19892.8824NM_001304718
PTENhsa-miR-338-3p92.6307NM_001304718
PTENhsa-miR-548ar-3p92.6032NM_001304718
PTENhsa-miR-3065-3p92.6018NM_001304718
PTENhsa-miR-337-3p92.4998NM_001304718
PTENhsa-miR-548bc92.2699NM_001304718
PTENhsa-miR-548e-3p92.2699NM_001304718
PTENhsa-miR-548f-3p92.2699NM_001304718
PTENhsa-miR-548az-3p92.2699NM_001304718
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Motifs and transcription factors (TFs) regulating PTEN

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PTENhdpi__NFIXNFIX (directAnnotation).
PTENhdpi__ZNF193ZSCAN9 (directAnnotation).
PTENhdpi__TP73TP73 (directAnnotation).
PTENmetacluster_52.11ZNF184 (directAnnotation).
PTENtransfac_pro__M06917ZNF236 (directAnnotation).
PTENmetacluster_22.20MAFG (directAnnotation).
PTENmetacluster_26.3ZNF232 (directAnnotation).
PTENtransfac_public__M00240NKX2-5 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
PTEN"Phosphatidylethanolamine"

DB04327

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."