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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PSMF1

Summary for PSMF1

Gene informationGene symbol

PSMF1

Ensembl ID

ENSG00000125818

Entrez ID

9491

Gene nameproteasome inhibitor subunit 1
SynonymsPI31
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: PSMF1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.3762820.00e+00

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells-0.3062190.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes0.3907160.00e+00

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.2766352.40e-15

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.2519991.42e-09

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.3506640.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepostMalignant cells-0.3244720.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells0.4902782.10e-29

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.3633630.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells-0.2677240.00e+00

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Expression of PSMF1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PSMF1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PSMF1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PSMF1hsa-miR-6852-5p97.0173NM_001323408
PSMF1hsa-miR-659-3p96.3831NM_006814
PSMF1hsa-miR-76092.3801NM_006814
PSMF1hsa-miR-449592.3187NM_006814
PSMF1hsa-miR-2116-5p91.4241NM_001323409
PSMF1hsa-miR-26b-3p90.844NM_001323409
PSMF1hsa-miR-66590.0275NM_006814
PSMF1hsa-miR-444787.9249NM_001323408
PSMF1hsa-miR-1212587.8821NM_001323408
PSMF1hsa-miR-466087.3629NM_001323409
PSMF1hsa-miR-118486.6456NM_006814
PSMF1hsa-miR-6770-5p84.8872NM_001323409
PSMF1hsa-miR-4666a-5p84.4614NM_001323409
PSMF1hsa-miR-807584.3556NM_001323409
PSMF1hsa-miR-990284.264NM_001323410
PSMF1hsa-miR-3189-3p84.2524NM_001323409
PSMF1hsa-miR-584-5p83.5279NM_001323408
PSMF1hsa-miR-6721-5p82.924NM_006814
PSMF1hsa-miR-6804-3p82.4377NM_001323408
PSMF1hsa-miR-4700-5p81.9209NM_001323408
PSMF1hsa-miR-4742-3p81.8859NM_006814
PSMF1hsa-miR-939-3p81.7598NM_006814
PSMF1hsa-miR-758-5p81.6691NM_001323408
PSMF1hsa-miR-191381.3785NM_006814
PSMF1hsa-miR-4725-3p81.3676NM_001323408
PSMF1hsa-miR-6780b-5p81.3676NM_001323408
PSMF1hsa-miR-3688-5p81.1926NM_006814
PSMF1hsa-miR-569880.9759NM_001323409
PSMF1hsa-miR-4723-5p80.9759NM_001323409
PSMF1hsa-miR-6870-5p80.9759NM_001323409
PSMF1hsa-miR-7111-5p80.9759NM_001323409
PSMF1hsa-miR-58680.9268NM_006814
PSMF1hsa-miR-125380.7897NM_001323409
PSMF1hsa-miR-653-3p80.7317NM_001323408
PSMF1hsa-miR-6742-3p80.684NM_001323408
PSMF1hsa-miR-464380.5698NM_001323409
PSMF1hsa-miR-504780.2391NM_006814
PSMF1hsa-miR-1301-3p80.2391NM_006814
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Motifs and transcription factors (TFs) regulating PSMF1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PSMF1taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
PSMF1jaspar__MA1483.2ELF2 (directAnnotation).
PSMF1hdpi__ETV4ETV4 (directAnnotation).
PSMF1hdpi__FLI1FLI1 (directAnnotation).
PSMF1taipale_tf_pairs__ELK1_HOXA1_RCCGGAAGTAATTA_HTELK1; HOXA1 (directAnnotation).
PSMF1metacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
PSMF1taipale_tf_pairs__GCM1_ETV4_RTGCGGGCGGAAGTR_CAPETV4; GCM1 (directAnnotation).
PSMF1taipale_tf_pairs__FOXO1_ELK3_RCCGGAWGTKKW_CAPELK3; FOXO1 (directAnnotation).
PSMF1kznf__ZNF384_Schmitges2016_RCADEZNF384 (directAnnotation).
PSMF1taipale_tf_pairs__ETV2_FOXO6_RCCGGATGTTKWN_CAPETV2; FOXO6 (directAnnotation).
PSMF1taipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
PSMF1metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
PSMF1metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
PSMF1taipale_tf_pairs__MEIS1_ELF1_NTGCCGGAAGTN_CAP_reprELF1; MEIS1 (directAnnotation).
PSMF1metacluster_166.2ELK4; ETS1; ETS1; ETV1; ETV3; ETV4; ETV5; ETV7 (directAnnotation). GABPA (inferredBy_Orthology).
PSMF1swissregulon__hs__ELF2ELF2 (directAnnotation).
PSMF1taipale_tf_pairs__ETV5_FOXI1_RSCGGATGTTGN_CAPETV5; FOXI1 (directAnnotation).
PSMF1taipale_tf_pairs__ELK1_FOXI1_RSCGGATGTKKN_CAPELK1; FOXI1 (directAnnotation).
PSMF1taipale_tf_pairs__ERF_FOXI1_RSCGGATGTTKWN_CAP_reprERF; FOXI1 (directAnnotation).
PSMF1metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
PSMF1taipale_tf_pairs__FOXO1_ELK1_RSCGGATGTTRTN_CAPELK1; FOXO1 (directAnnotation).
PSMF1taipale_tf_pairs__ETV2_FOXI1_RSCGGATGTTKW_CAPETV2; FOXI1 (directAnnotation).
PSMF1taipale_tf_pairs__HOXB2_ELK3_RSCGGAAGTMRTTA_CAPELK3; HOXB2 (directAnnotation).
PSMF1jaspar__MA1957.1ELK1 (directAnnotation).
PSMF1taipale_tf_pairs__GCM1_ELK1_RTGCGGGCGGAAGTN_CAP_2ELK1; GCM1 (directAnnotation).
PSMF1metacluster_134.4AHDC1; ARID5B; FOXA1; FOXA1; FOXA2; FOXA2; FOXA3; FOXA3; FOXJ3; FOXO3; FOXP1; FOXP4 (directAnnotation).
PSMF1homer__ATTGCGCAAC_CEBPCEBPB (inferredBy_Orthology).
PSMF1transfac_pro__M01968FOXO1 (directAnnotation).
PSMF1transfac_pro__M04826EP300 (directAnnotation).
PSMF1hdpi__ELF2ELF2 (directAnnotation).
PSMF1swissregulon__hs__ELK1ELK1 (directAnnotation).
PSMF1transfac_pro__M00492STAT1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."