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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PSMD11

Summary for PSMD11

Gene informationGene symbol

PSMD11

Ensembl ID

ENSG00000108671

Entrez ID

5717

Gene nameproteasome 26S subunit, non-ATPase 11
SynonymsMGC3844|p44.5|Rpn6|S9
Gene typeprotein_coding
UniProtAcc

O00231


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Dataset with differentially expressed gene: PSMD11

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells-0.5508881.04e-02

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.6913570.00e+00

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells-0.4217260.00e+00

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.2986320.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes-0.2706460.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.2709620.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells-0.2814546.87e-44

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.6229610.00e+00

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.5240021.77e-27

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.6912730.00e+00

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells-0.5916938.29e-35

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.492720.00e+00

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells0.4543620.00e+00

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Expression of PSMD11 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PSMD11

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PSMD11

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PSMD11hsa-miR-76593.8591NM_001270482
PSMD11hsa-miR-2276-3p92.297NM_001270482
PSMD11hsa-miR-5197-3p92.1362NM_002815
PSMD11hsa-miR-11181-3p91.5916NM_001270482
PSMD11hsa-miR-615-3p90.6244NM_002815
PSMD11hsa-miR-60790.0385NM_002815
PSMD11hsa-miR-806888.6634NM_002815
PSMD11hsa-miR-431687.5981NM_002815
PSMD11hsa-miR-367186.6802NM_002815
PSMD11hsa-miR-505-5p86.5593NM_001270482
PSMD11hsa-miR-1213686.287NM_002815
PSMD11hsa-miR-3679-3p86.1382NM_001270482
PSMD11hsa-miR-3150b-3p85.0258NM_002815
PSMD11hsa-miR-568384.584NM_001270482
PSMD11hsa-miR-3140-3p84.4709NM_002815
PSMD11hsa-miR-453083.7968NM_001270482
PSMD11hsa-miR-892a83.563NM_002815
PSMD11hsa-miR-659-3p82.8547NM_002815
PSMD11hsa-miR-478482.4011NM_002815
PSMD11hsa-miR-548aj-3p82.2405NM_001270482
PSMD11hsa-miR-548x-3p82.2405NM_001270482
PSMD11hsa-miR-1277-5p82.1825NM_002815
PSMD11hsa-miR-501-3p82.0834NM_002815
PSMD11hsa-miR-502-3p82.0834NM_002815
PSMD11hsa-miR-443582.0053NM_002815
PSMD11hsa-miR-6876-5p81.7837NM_001270482
PSMD11hsa-miR-447681.7837NM_001270482
PSMD11hsa-miR-513a-5p81.7114NM_001270482
PSMD11hsa-miR-196a-5p80.3754NM_001270482
PSMD11hsa-miR-196b-5p80.3754NM_001270482
PSMD11hsa-miR-519080.3679NM_001270482
PSMD11hsa-miR-4640-5p80.3489NM_002815
PSMD11hsa-miR-18a-3p80.2743NM_002815
PSMD11hsa-miR-4693-5p80.0533NM_002815
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Motifs and transcription factors (TFs) regulating PSMD11

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PSMD11taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
PSMD11metacluster_34.4ETS1; ETS1; ETS1; HCFC1; SIX5; SIX5; SIX5; SIX5; SMARCC2; SMARCC2; THAP11; THAP11; ZNF143; ZNF143; ZNF143; ZNF143 (directAnnotation). TBX2; THAP11; THAP11; ZNF143 (inferredBy_Orthology).
PSMD11metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
PSMD11taipale_tf_pairs__ELK1_EOMES_RSCGGAANNAGGYGYNA_CAP_reprELK1; EOMES (directAnnotation).
PSMD11taipale_tf_pairs__ERF_HES7_NNCACGTGNNNNCCGGAANN_CAP_reprERF; HES7 (directAnnotation).
PSMD11metacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
PSMD11hdpi__ETV4ETV4 (directAnnotation).
PSMD11jaspar__MA1122.1TFDP1 (directAnnotation).
PSMD11swissregulon__hs__ELF2ELF2 (directAnnotation).
PSMD11swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
PSMD11metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
PSMD11metacluster_34.3EGR1; ETS1; SETDB1; SIX5; SIX5; ZNF143; ZNF76 (directAnnotation).
PSMD11taipale_tf_pairs__MEIS1_ELF1_NTGCCGGAAGTN_CAP_reprELF1; MEIS1 (directAnnotation).
PSMD11taipale_tf_pairs__ELK1_HOXA1_RCCGGAAGTAATTA_HTELK1; HOXA1 (directAnnotation).
PSMD11taipale_tf_pairs__ETV2_DRGX_RSCGGAWRYATTA_CAP_reprDRGX; ETV2 (directAnnotation).
PSMD11taipale_tf_pairs__ELK1_FOXI1_WGTTKMCGGAWRTN_CAPELK1; FOXI1 (directAnnotation).
PSMD11metacluster_135.11NR2C2 (directAnnotation).
PSMD11metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
PSMD11metacluster_144.3ZNF704; ZNF704 (directAnnotation).
PSMD11metacluster_7.13ZFX (directAnnotation).
PSMD11kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
PSMD11metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
PSMD11metacluster_160.20JUND; PRDM15 (directAnnotation).
PSMD11cisbp__M00341PAX6 (directAnnotation).
PSMD11metacluster_198.3ZFP64 (directAnnotation).
PSMD11metacluster_61.1DEAF1; DEAF1 (directAnnotation).
PSMD11cisbp__M00788ZFY (inferredBy_Orthology).
PSMD11metacluster_175.1ZNF283 (directAnnotation).
PSMD11metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
PSMD11kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
PSMD11metacluster_151.2ZNF23 (directAnnotation).
PSMD11transfac_pro__M03806ZBTB7C (directAnnotation).
PSMD11taipale_tf_pairs__FOXO1_ELK1_TGTTGCCGGANNN_CAPELK1; FOXO1 (directAnnotation).
PSMD11metacluster_7.5PLAGL1; PLAGL1 (directAnnotation).
PSMD11dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
PSMD11jaspar__MA1721.1ZNF93 (directAnnotation).
PSMD11dbtfbs__ZBTB8A_HEK293_ENCSR481FEC_merged_N1ZBTB8A (directAnnotation).
PSMD11dbtfbs__ZNF407_representative_N1ZNF407 (directAnnotation).
PSMD11kznf__ZNF383_Imbeault2017_OM_RCADEZNF383 (directAnnotation).
PSMD11cisbp__M01863ZNF711 (inferredBy_Orthology).
PSMD11transfac_pro__M12697ZNF142 (directAnnotation).
PSMD11transfac_pro__M02786PLAGL1 (inferredBy_Orthology).
PSMD11transfac_pro__M01973PLAG1 (directAnnotation).
PSMD11tfdimers__MD00483ZBTB14 (directAnnotation).
PSMD11transfac_pro__M02861GATA6 (inferredBy_Orthology).
PSMD11metacluster_143.13ZBTB7A (directAnnotation).
PSMD11taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
PSMD11hdpi__ELF2ELF2 (directAnnotation).
PSMD11metacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
PSMD11swissregulon__hs__ELK1ELK1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."