DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene (This gene does not contain this module)

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target

Gene: PSAT1

Summary for PSAT1

Gene informationGene symbol

PSAT1

Ensembl ID

ENSG00000135069

Entrez ID

29968

Gene namephosphoserine aminotransferase 1
SynonymsPSA|PSAT
Gene typeprotein_coding
UniProtAcc

Q9Y617


Top

Dataset with differentially expressed gene: PSAT1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.6312130.00e+00

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells-0.2953070.00e+00

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells-0.3006410.00e+00

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepostMalignant cells0.6357663.66e-06

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepreMalignant cells0.41951.43e-09

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.5810770.00e+00

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells-0.4926760.00e+00

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.3916651.52e-24

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.4234811.62e-16

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.4141631.21e-17

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells-0.3770994.01e-13

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells0.2674327.33e-38

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepostMalignant cells-0.6798310.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreMalignant cells-0.4461040.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells1.992770.00e+00

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.7503850.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells-0.6450680.00e+00

Top

Expression of PSAT1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to PSAT1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

Top

MicroRNAs (miRNA) regulating PSAT1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PSAT1hsa-miR-5590-3p98.4302NM_021154
PSAT1hsa-miR-142-5p98.4302NM_021154
PSAT1hsa-miR-427296.7513NM_058179
PSAT1hsa-miR-340-5p96.5502NM_021154
PSAT1hsa-miR-888-3p95.0426NM_058179
PSAT1hsa-miR-3925-5p93.851NM_058179
PSAT1hsa-miR-808393.5526NM_058179
PSAT1hsa-miR-3117-3p93.1815NM_058179
PSAT1hsa-miR-200c-3p92.6049NM_021154
PSAT1hsa-miR-200b-3p92.6049NM_021154
PSAT1hsa-miR-42992.6049NM_021154
PSAT1hsa-miR-708-3p91.3003NM_058179
PSAT1hsa-miR-548l90.5671NM_058179
PSAT1hsa-miR-6853-3p89.255NM_058179
PSAT1hsa-miR-4790-3p89.0338NM_058179
PSAT1hsa-miR-323a-3p86.8536NM_058179
PSAT1hsa-miR-5197-5p86.5859NM_058179
PSAT1hsa-miR-145-5p84.6265NM_021154
PSAT1hsa-miR-5195-3p84.6265NM_021154
PSAT1hsa-miR-4639-3p83.9371NM_058179
PSAT1hsa-miR-3065-3p80.1836NM_021154
Page: 1

Top

Motifs and transcription factors (TFs) regulating PSAT1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PSAT1cisbp__M00808MYPOP (inferredBy_Orthology).
PSAT1metacluster_198.7AHR; ZBTB14; ZBTB14; ZBTB14 (directAnnotation).
PSAT1metacluster_172.6CHD2; E2F1 (directAnnotation).
PSAT1taipale_tf_pairs__ATF4_TEF_RNMTGATGCAATN_CAPATF4; TEF (directAnnotation).
PSAT1metacluster_174.3MBD2; NFYA; NFYB; NFYC; PBX3 (directAnnotation).
PSAT1metacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
PSAT1metacluster_52.11ZNF184 (directAnnotation).
PSAT1metacluster_98.1ZNF524 (directAnnotation).
PSAT1taipale_tf_pairs__POU2F1_ELK1_NCCGGATATGCAN_CAPELK1; POU2F1 (directAnnotation).
PSAT1hocomoco__ZN490_HUMAN.H11MO.0.CZNF490 (directAnnotation).
PSAT1jaspar__MA0604.1ATF1 (inferredBy_Orthology).
PSAT1metacluster_174.6NFYA; NFYB; NFYB; NFYC (directAnnotation).
PSAT1cisbp__M04023CREB1 (directAnnotation).
PSAT1metacluster_2.9IRF2; IRF2; IRF2; PRDM1; PRDM1 (directAnnotation). PRDM1 (inferredBy_Orthology).
PSAT1taipale_tf_pairs__CEBPG_CREB3L1_NGCCACGCAAYN_CAP_reprCEBPG; CREB3L1 (directAnnotation).
PSAT1metacluster_46.4CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; DBP; DBP; EP300; GATAD2A; HES2 (directAnnotation). CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPE; CEBPE; CEBPE; CEBPG; CEBPG; HLF; HLF (inferredBy_Orthology).
PSAT1taipale_tf_pairs__HOXB2_ELK1_TAATKRCCGGAAGNN_CAP_reprELK1; HOXB2 (directAnnotation).
PSAT1taipale_tf_pairs__HOXD12_ELK3_NTTTAYNNCCGGAARNN_CAP_reprELK3; HOXD12 (directAnnotation).
PSAT1taipale_tf_pairs__ETV2_DRGX_RSCGGAWRYATTA_CAP_reprDRGX; ETV2 (directAnnotation).
PSAT1jaspar__MA0502.2NFYB (directAnnotation).
PSAT1transfac_pro__M04826EP300 (directAnnotation).
PSAT1metacluster_81.7CREB1 (directAnnotation).
PSAT1taipale_tf_pairs__ERF_FOXI1_TGTTKMCGGAWRN_CAP_reprERF; FOXI1 (directAnnotation).
PSAT1taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
Page: 1

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
PSAT1"Glutamic acid"

DB00142

small molecule
PSAT1"Pyridoxal phosphate"

DB00114

small molecule
Page: 1




1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."