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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PRMT2

Summary for PRMT2

Gene informationGene symbol

PRMT2

Ensembl ID

ENSG00000160310

Entrez ID

3275

Gene nameprotein arginine methyltransferase 2
SynonymsHRMT1L1|MGC111373
Gene typeprotein_coding
UniProtAcc

P55345


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Dataset with differentially expressed gene: PRMT2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostCD8+ T cells0.2668542.25e-35

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostNK cells0.3039510.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreNK cells0.5483750.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD4+ T cells0.3720360.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD8+ T cells0.4359030.00e+00

GSE197268_Axi-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyaxi-cel (CAR-T)preNK cells0.4243090.00e+00

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD4+ T cells0.3293791.83e-16

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells-0.2527663.13e-02

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)postNK cells0.2987336.49e-28

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)preNK cells0.3608377.44e-34

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)preCD8+ T cells0.35890.00e+00

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)preCD4+ T cells0.3255620.00e+00

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.6530290.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells0.3513440.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells0.7935280.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.465330.00e+00

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.3514560.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells-0.3382960.00e+00

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Expression of PRMT2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PRMT2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PRMT2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PRMT2hsa-miR-95-5p96.5427NM_001286676
PRMT2hsa-miR-3613-3p93.5506NM_001242865
PRMT2hsa-miR-335-3p92.9022NM_001242866
PRMT2hsa-miR-3190-3p89.9264NM_001286676
PRMT2hsa-miR-5581-3p89.4926NM_001242866
PRMT2hsa-miR-4697-3p87.6188NM_001242865
PRMT2hsa-miR-7162-3p86.0148NM_001242865
PRMT2hsa-miR-4762-3p85.3081NM_001242865
PRMT2hsa-miR-374b-3p84.9201NM_001242865
PRMT2hsa-miR-138-2-3p84.7805NM_001242865
PRMT2hsa-miR-365084.4377NM_001242865
PRMT2hsa-miR-314884.187NM_001242866
PRMT2hsa-miR-6890-3p83.9929NM_001242865
PRMT2hsa-miR-446382.4971NM_001242866
PRMT2hsa-miR-6516-5p82.3319NM_001242865
PRMT2hsa-miR-428282.2885NM_001286676
PRMT2hsa-miR-6738-3p81.9764NM_001242866
PRMT2hsa-miR-140-3p80.932NM_001242866
PRMT2hsa-miR-499b-5p80.254NM_001242865
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Motifs and transcription factors (TFs) regulating PRMT2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PRMT2transfac_pro__M05479ZNF580 (directAnnotation).
PRMT2metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
PRMT2metacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
PRMT2taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
PRMT2transfac_pro__M00652NRF1 (directAnnotation).
PRMT2transfac_pro__M04866HDAC2 (directAnnotation).
PRMT2transfac_pro__M02113POU2AF1 (directAnnotation).
PRMT2jaspar__MA1939.1SREBF2 (directAnnotation).
PRMT2kznf__ZNF184_Schmitges2016_RCADEZNF184 (directAnnotation).
PRMT2hocomoco__PO5F1_HUMAN.H11MO.1.APOU5F1 (directAnnotation).
PRMT2kznf__ZSCAN29_TF_Evolution_PBMZSCAN29 (directAnnotation).
PRMT2metacluster_85.7ZSCAN29; ZSCAN29 (directAnnotation).
PRMT2metacluster_22.15BACH1 (directAnnotation).
PRMT2metacluster_22.14BACH1 (inferredBy_Orthology).
PRMT2taipale_tf_pairs__PITX1_HOXA3_TAATKRNNNNGGATTA_CAPHOXA3; PITX1 (directAnnotation).
PRMT2tfdimers__MD00415PDX1; POU3F2 (directAnnotation).
PRMT2tfdimers__MD00302IRF7; IRF8 (directAnnotation).
PRMT2hdpi__PQBP1PQBP1 (directAnnotation).
PRMT2tfdimers__MD00007E2F1; IRF8 (directAnnotation).
PRMT2transfac_pro__M02109NKX2-2 (directAnnotation).
PRMT2transfac_pro__M06806PEG3 (directAnnotation).
PRMT2transfac_public__M00416ALX1 (directAnnotation).
PRMT2metacluster_70.17POU1F1 (directAnnotation).
PRMT2tfdimers__MD00414IRF1; IRF2; IRF3; IRF4; IRF5; IRF7; IRF8; IRF9; POU5F1 (directAnnotation).
PRMT2transfac_pro__M04849RELA (directAnnotation).
PRMT2transfac_pro__M05842ZBTB41 (inferredBy_Orthology).
PRMT2tfdimers__MD00439ATF1; HOXA13 (directAnnotation).
PRMT2metacluster_1.9CDX1; CDX1; CDX2; CDX2; CDX2; CDX4; CDX4; EVX1; HOXA10; HOXA10; HOXA10; HOXA10; HOXA10; HOXA10; HOXA11; HOXA11; HOXA11; HOXA13; HOXA13; HOXA13; HOXA13; HOXA13; HOXB13; HOXB13; HOXB13; HOXB13; HOXB13; HOXB9; HOXB9; HOXC10; HOXC10; HOXC10; HOXC10; HOXC10; HOXC11; HOXC11; HOXC11; HOXC11; HOXC11; HOXC11; HOXC12; HOXC12; HOXC12; HOXC13; HOXC13; HOXC9; HOXC9; HOXD10; HOXD10; HOXD10; HOXD10; HOXD10; HOXD11; HOXD11; HOXD12; HOXD13; HOXD13; HOXD13; HOXD13; HOXD13; HOXD13; HOXD9; HOXD9; HOXD9; HOXD9; ZNF843 (directAnnotation). CDX1; CDX4; CDX4; DBX2; HOXA11; HOXA13; HOXA13; HOXA9; HOXB13; HOXC11; HOXC13; HOXD10; HOXD12; HOXD12; HOXD13; HOXD13; HOXD9; HOXD9 (inferredBy_Orthology).
PRMT2transfac_pro__M05879ZNF713 (directAnnotation).
PRMT2tfdimers__MD00247CRX; HOXA10 (directAnnotation).
PRMT2tfdimers__MD00527IRF1; IRF2; IRF3; IRF4; IRF5; IRF6; IRF7; IRF8; ZEB1 (directAnnotation).
PRMT2cisbp__M00294HOXD13 (directAnnotation).
PRMT2tfdimers__MD00499POU5F1; TAF6; TBP (directAnnotation).
PRMT2dbtfbs__SETDB1_HEK293_ENCSR348AGV_merged_N1SETDB1 (directAnnotation).
PRMT2tfdimers__MD00147ELF5; TFAP2C (directAnnotation).
PRMT2transfac_pro__M06196ZNF81 (directAnnotation).
PRMT2transfac_public__M00240NKX2-5 (directAnnotation).
PRMT2tfdimers__MD00165CRX; FOS; FOSB; FOSL1; FOSL2; JUN; JUNB; JUND (directAnnotation).
PRMT2cisbp__M00212SOX13 (inferredBy_Orthology).
PRMT2hdpi__FLI1FLI1 (directAnnotation).
PRMT2taipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
PRMT2taipale_tf_pairs__ETV5_EVX1_RSCGGWAATKR_CAPETV5; EVX1 (directAnnotation).
PRMT2taipale_tf_pairs__ETV2_PITX1_RSCGGAANNNNNGGMTTAN_CAPETV2; PITX1 (directAnnotation).
PRMT2kznf__ZNF441_Imbeault2017_OM_RCADEZNF441 (directAnnotation).
PRMT2transfac_pro__M06104ZNF16 (directAnnotation).
PRMT2tfdimers__MD00208IRF1; LTF (directAnnotation).
PRMT2taipale_tf_pairs__ETV2_DLX3_RSCGGAANNNNNNNTAATKR_CAP_reprDLX3; ETV2 (directAnnotation).
PRMT2taipale_cyt_meth__POU5F1_NYTAATTATGCGNRN_FL_meth_reprPOU5F1 (directAnnotation).
PRMT2tfdimers__MD00270DBX2; HMGA1; HMGA2 (directAnnotation).
PRMT2metacluster_178.5PAX3; ZNF337; ZNF337 (directAnnotation). PAX3 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."