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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: PRKCA

Summary for PRKCA

Gene informationGene symbol

PRKCA

Ensembl ID

ENSG00000154229

Entrez ID

5578

Gene nameprotein kinase C alpha
SynonymsPKCA|PKCalpha
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: PRKCA

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells0.8539112.78e-08

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells0.2908253.65e-16

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells-0.3231750.00e+00

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Expression of PRKCA in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PRKCA

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

PRKCA

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating PRKCA

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PRKCAhsa-miR-6878-3p99.2354NM_002737
PRKCAhsa-miR-6744-3p99.2242NM_002737
PRKCAhsa-miR-4757-5p99.1191NM_002737
PRKCAhsa-miR-848598.8556NM_002737
PRKCAhsa-miR-6781-3p97.4429NM_002737
PRKCAhsa-miR-2682-3p97.0975NM_002737
PRKCAhsa-miR-5692a97.039NM_002737
PRKCAhsa-miR-340-5p96.0775NM_002737
PRKCAhsa-miR-428295.8191NM_002737
PRKCAhsa-miR-92a-1-5p95.4029NM_002737
PRKCAhsa-miR-127595.1305NM_002737
PRKCAhsa-miR-185-3p94.5938NM_002737
PRKCAhsa-miR-428394.5842NM_002737
PRKCAhsa-miR-548p94.0888NM_002737
PRKCAhsa-miR-1211993.7005NM_002737
PRKCAhsa-miR-1468-3p93.6292NM_002737
PRKCAhsa-miR-448992.8591NM_002737
PRKCAhsa-miR-4668-3p91.998NM_002737
PRKCAhsa-miR-6846-5p91.8452NM_002737
PRKCAhsa-miR-6848-5p91.8452NM_002737
PRKCAhsa-miR-150-5p91.2329NM_002737
PRKCAhsa-miR-1266-3p91.0703NM_002737
PRKCAhsa-miR-4665-5p90.8224NM_002737
PRKCAhsa-miR-316390.0518NM_002737
PRKCAhsa-miR-6751-5p89.9088NM_002737
PRKCAhsa-miR-500a-5p89.8194NM_002737
PRKCAhsa-miR-1211789.7758NM_002737
PRKCAhsa-miR-6868-3p89.7049NM_002737
PRKCAhsa-miR-532-3p89.6941NM_002737
PRKCAhsa-miR-548x-3p89.401NM_002737
PRKCAhsa-miR-548aj-3p89.401NM_002737
PRKCAhsa-miR-6792-5p89.2856NM_002737
PRKCAhsa-miR-4711-3p88.9389NM_002737
PRKCAhsa-miR-6799-5p88.8604NM_002737
PRKCAhsa-miR-478488.6554NM_002737
PRKCAhsa-miR-3150b-3p88.6554NM_002737
PRKCAhsa-miR-652-5p88.574NM_002737
PRKCAhsa-miR-5582-3p88.5113NM_002737
PRKCAhsa-miR-6764-3p88.2388NM_002737
PRKCAhsa-miR-2116-3p88.1057NM_002737
PRKCAhsa-miR-548ae-3p87.677NM_002737
PRKCAhsa-miR-548aq-3p87.677NM_002737
PRKCAhsa-miR-548j-3p87.677NM_002737
PRKCAhsa-miR-548ah-3p87.677NM_002737
PRKCAhsa-miR-548am-3p87.677NM_002737
PRKCAhsa-miR-950087.5457NM_002737
PRKCAhsa-miR-516a-3p87.5362NM_002737
PRKCAhsa-miR-516b-3p87.5362NM_002737
PRKCAhsa-miR-7162-5p87.5362NM_002737
PRKCAhsa-miR-548n87.5166NM_002737
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Motifs and transcription factors (TFs) regulating PRKCA

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PRKCAtransfac_pro__M06074ZNF732 (directAnnotation).
PRKCAmetacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
PRKCAhocomoco__KLF13_HUMAN.H11MO.0.DKLF13 (directAnnotation).
PRKCAkznf__ZBTB14_Schmitges2016_RCADEZBTB14 (directAnnotation).
PRKCAtransfac_pro__M04617ZBTB7A (directAnnotation).
PRKCAmetacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
PRKCAtaipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
PRKCAtaipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
PRKCAtransfac_pro__M07387ZBTB7A (directAnnotation).
PRKCAtransfac_pro__M07436WT1 (directAnnotation).
PRKCAtransfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
PRKCAtransfac_pro__M00716ZBTB14 (directAnnotation).
PRKCAswissregulon__hs__CHD1CHD1 (directAnnotation).
PRKCAhdpi__HIP2UBE2K (directAnnotation).
PRKCAmetacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
PRKCAtransfac_pro__M04893TAF1 (directAnnotation).
PRKCAtransfac_pro__M03876ZBTB33 (directAnnotation).
PRKCAmetacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
PRKCAmetacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
PRKCAkznf__ZNF441_Imbeault2017_RP_RCADEZNF441 (directAnnotation).
PRKCAtransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
PRKCAmetacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
PRKCAjaspar__MA0079.5SP1 (directAnnotation).
PRKCAtransfac_pro__M01253CNOT3 (directAnnotation).
PRKCAmetacluster_153.4SOX12; SOX14; SRY (directAnnotation). SOX5 (inferredBy_Orthology).
PRKCAtransfac_pro__M04817ZBTB33 (directAnnotation).
PRKCAcisbp__M07938E2F1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
PRKCA"alpha-Tocopherol succinate"

DB14001

small molecule
PRKCA"Aprinocarsen"

DB06451

biotech
PRKCA"Bryostatin 1"

DB11752

small molecule
PRKCA"D-alpha-Tocopherol acetate"

DB14002

small molecule
PRKCA"Ellagic acid"

DB08846

small molecule
PRKCA"Ingenol mebutate"

DB05013

small molecule
PRKCA"Midostaurin"

DB06595

small molecule
PRKCA"Perifosine"

DB06641

small molecule
PRKCA"Phosphatidyl serine"

DB00144

small molecule
PRKCA"Vitamin E"

DB00163

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."