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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PRKAB2

Summary for PRKAB2

Gene informationGene symbol

PRKAB2

Ensembl ID

ENSG00000131791

Entrez ID

5565

Gene nameprotein kinase AMP-activated non-catalytic subunit beta 2
SynonymsNA
Gene typeprotein_coding
UniProtAcc

O43741


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Dataset with differentially expressed gene: PRKAB2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.4910540.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.4293180.00e+00

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Expression of PRKAB2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PRKAB2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PRKAB2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PRKAB2hsa-miR-431096.5699NM_005399
PRKAB2hsa-miR-5003-3p96.0931NM_005399
PRKAB2hsa-miR-7853-5p95.5262NM_005399
PRKAB2hsa-miR-105-5p94.8546NM_005399
PRKAB2hsa-miR-378g94.7935NM_005399
PRKAB2hsa-miR-1250-3p94.6462NM_005399
PRKAB2hsa-miR-7157-5p94.4597NM_005399
PRKAB2hsa-miR-6730-3p93.4326NM_005399
PRKAB2hsa-miR-425192.9754NM_005399
PRKAB2hsa-miR-29c-3p92.0028NM_005399
PRKAB2hsa-miR-29b-3p92.0028NM_005399
PRKAB2hsa-miR-29a-3p92.0028NM_005399
PRKAB2hsa-miR-498-3p91.0854NM_005399
PRKAB2hsa-miR-568889.9395NM_005399
PRKAB2hsa-miR-4695-5p89.8471NM_005399
PRKAB2hsa-miR-314889.6599NM_005399
PRKAB2hsa-miR-451989.6246NM_005399
PRKAB2hsa-miR-1227-3p88.8627NM_005399
PRKAB2hsa-miR-153-5p87.4857NM_005399
PRKAB2hsa-miR-330-3p87.2783NM_005399
PRKAB2hsa-miR-548e-5p86.1061NM_005399
PRKAB2hsa-miR-3152-3p85.4685NM_005399
PRKAB2hsa-miR-767-5p85.4193NM_005399
PRKAB2hsa-miR-5010-3p85.1548NM_005399
PRKAB2hsa-miR-495-3p84.6635NM_005399
PRKAB2hsa-miR-44883.5875NM_005399
PRKAB2hsa-miR-5088-3p83.0224NM_005399
PRKAB2hsa-miR-5001-3p82.7888NM_005399
PRKAB2hsa-miR-561-3p82.7205NM_005399
PRKAB2hsa-miR-6739-5p82.3919NM_005399
PRKAB2hsa-miR-6733-5p82.3919NM_005399
PRKAB2hsa-miR-664b-5p82.3832NM_005399
PRKAB2hsa-miR-1213581.8848NM_005399
PRKAB2hsa-miR-430681.6296NM_005399
PRKAB2hsa-miR-4668-5p81.0586NM_005399
PRKAB2hsa-miR-494-3p80.3643NM_005399
PRKAB2hsa-miR-4661-3p80.2124NM_005399
PRKAB2hsa-miR-455-3p80.0654NM_005399
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Motifs and transcription factors (TFs) regulating PRKAB2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PRKAB2metacluster_7.13ZFX (directAnnotation).
PRKAB2metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
PRKAB2metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
PRKAB2kznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
PRKAB2jaspar__MA0079.5SP1 (directAnnotation).
PRKAB2cisbp__M00968MTF2 (directAnnotation).
PRKAB2cisbp__M00341PAX6 (directAnnotation).
PRKAB2metacluster_198.3ZFP64 (directAnnotation).
PRKAB2metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
PRKAB2metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
PRKAB2cisbp__M00788ZFY (inferredBy_Orthology).
PRKAB2hdpi__ZNF304ZNF304 (directAnnotation).
PRKAB2metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
PRKAB2transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
PRKAB2transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
PRKAB2transfac_pro__M03806ZBTB7C (directAnnotation).
PRKAB2transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."