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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PPP6R3

Summary for PPP6R3

Gene informationGene symbol

PPP6R3

Ensembl ID

ENSG00000110075

Entrez ID

55291

Gene nameprotein phosphatase 6 regulatory subunit 3
SynonymsC11orf23|DKFZp781E17107|DKFZp781E2374|DKFZp781O2362|FLJ11058|FLJ43065|KIAA1558|MGC125711|MGC125712|PP6R3|SAP190|SAPL|SAPLa|SAPS3
Gene typeprotein_coding
UniProtAcc

Q5H9R7


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Dataset with differentially expressed gene: PPP6R3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.2560031.67e-25

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Expression of PPP6R3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PPP6R3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PPP6R3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PPP6R3hsa-miR-364699.4445NM_001164160
PPP6R3hsa-miR-338-5p98.7081NM_001164160
PPP6R3hsa-miR-34b-3p98.2761NM_001164160
PPP6R3hsa-miR-6508-5p97.3112NM_001164160
PPP6R3hsa-miR-624-3p96.3046NM_001164160
PPP6R3hsa-miR-806796.1491NM_001164160
PPP6R3hsa-miR-366296.0818NM_001164160
PPP6R3hsa-miR-4666a-3p95.6647NM_001164160
PPP6R3hsa-miR-29b-1-5p94.7622NM_001164160
PPP6R3hsa-let-7c-3p94.7041NM_001164160
PPP6R3hsa-miR-6805-3p93.1602NM_001164160
PPP6R3hsa-miR-569193.1602NM_001164160
PPP6R3hsa-miR-4474-5p92.5568NM_001164164
PPP6R3hsa-miR-5587-5p92.3253NM_001164160
PPP6R3hsa-miR-135a-5p91.8703NM_001164160
PPP6R3hsa-miR-135b-5p91.8703NM_001164160
PPP6R3hsa-miR-660-5p91.0331NM_001164160
PPP6R3hsa-miR-6748-3p89.9504NM_001164160
PPP6R3hsa-miR-6833-3p89.5125NM_001164160
PPP6R3hsa-miR-194-3p89.4652NM_001164164
PPP6R3hsa-miR-3187-3p88.9218NM_001164160
PPP6R3hsa-miR-4761-5p88.8371NM_001164160
PPP6R3hsa-miR-317188.528NM_001164160
PPP6R3hsa-miR-6504-3p88.4401NM_001164160
PPP6R3hsa-miR-10399-5p88.4401NM_001164160
PPP6R3hsa-miR-498-5p88.0647NM_001164160
PPP6R3hsa-miR-216b-3p87.5992NM_001164160
PPP6R3hsa-miR-4703-5p87.196NM_001164160
PPP6R3hsa-miR-552-3p87.1853NM_001164160
PPP6R3hsa-miR-126-5p86.3054NM_001164160
PPP6R3hsa-miR-501-5p85.8544NM_001164160
PPP6R3hsa-miR-544b85.8375NM_001164160
PPP6R3hsa-miR-6757-3p85.5851NM_001164160
PPP6R3hsa-miR-6813-3p85.5813NM_001164160
PPP6R3hsa-miR-4733-3p85.5131NM_001164160
PPP6R3hsa-miR-64085.1869NM_001164160
PPP6R3hsa-miR-6852-3p85.177NM_001164164
PPP6R3hsa-miR-6770-5p85.1498NM_001164160
PPP6R3hsa-miR-4684-5p84.2899NM_001164160
PPP6R3hsa-miR-3942-5p84.1153NM_001164160
PPP6R3hsa-miR-16-5p83.9753NM_001164160
PPP6R3hsa-miR-15a-5p83.9753NM_001164160
PPP6R3hsa-miR-195-5p83.9753NM_001164160
PPP6R3hsa-miR-15b-5p83.9753NM_001164160
PPP6R3hsa-miR-4768-5p83.9739NM_001164160
PPP6R3hsa-miR-6809-3p83.9739NM_001164160
PPP6R3hsa-miR-570-3p83.684NM_001164160
PPP6R3hsa-miR-34c-3p83.2301NM_001164160
PPP6R3hsa-miR-449582.9019NM_001164160
PPP6R3hsa-miR-548ar-3p82.2372NM_001164160
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Motifs and transcription factors (TFs) regulating PPP6R3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PPP6R3metacluster_7.13ZFX (directAnnotation).
PPP6R3kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
PPP6R3cisbp__M00968MTF2 (directAnnotation).
PPP6R3metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
PPP6R3cisbp__M00341PAX6 (directAnnotation).
PPP6R3metacluster_198.3ZFP64 (directAnnotation).
PPP6R3metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
PPP6R3metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
PPP6R3cisbp__M00788ZFY (inferredBy_Orthology).
PPP6R3metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
PPP6R3metacluster_151.2ZNF23 (directAnnotation).
PPP6R3transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
PPP6R3transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."