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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PPP1R3B

Summary for PPP1R3B

Gene informationGene symbol

PPP1R3B

Ensembl ID

ENSG00000173281

Entrez ID

79660

Gene nameprotein phosphatase 1 regulatory subunit 3B
SynonymsFLJ14005|GL|PPP1R4
Gene typeprotein_coding
UniProtAcc

Q86XI6


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Dataset with differentially expressed gene: PPP1R3B

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.792010.00e+00

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Expression of PPP1R3B in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PPP1R3B

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PPP1R3B

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PPP1R3Bhsa-miR-6885-3p96.7063NM_001201329
PPP1R3Bhsa-miR-590-5p95.1412NM_001201329
PPP1R3Bhsa-miR-21-5p95.1412NM_001201329
PPP1R3Bhsa-miR-506-3p94.7343NM_001201329
PPP1R3Bhsa-miR-124-3p94.7343NM_001201329
PPP1R3Bhsa-miR-20a-5p94.1141NM_001201329
PPP1R3Bhsa-miR-106b-5p93.3791NM_001201329
PPP1R3Bhsa-miR-519d-3p92.8171NM_001201329
PPP1R3Bhsa-miR-3177-5p92.0637NM_001201329
PPP1R3Bhsa-miR-20b-5p91.8811NM_001201329
PPP1R3Bhsa-miR-430691.7779NM_001201329
PPP1R3Bhsa-miR-331-5p91.6529NM_001201329
PPP1R3Bhsa-miR-526b-3p91.0875NM_001201329
PPP1R3Bhsa-miR-106a-5p91.0875NM_001201329
PPP1R3Bhsa-miR-17-5p91.0007NM_001201329
PPP1R3Bhsa-miR-93-5p91.0007NM_001201329
PPP1R3Bhsa-miR-366290.6308NM_001201329
PPP1R3Bhsa-miR-426190.5307NM_001201329
PPP1R3Bhsa-miR-10394-5p89.2501NM_001201329
PPP1R3Bhsa-miR-120589.2501NM_001201329
PPP1R3Bhsa-miR-362-3p88.9012NM_001201329
PPP1R3Bhsa-miR-329-3p88.9012NM_001201329
PPP1R3Bhsa-miR-578788.8891NM_001201329
PPP1R3Bhsa-miR-450588.8891NM_001201329
PPP1R3Bhsa-miR-7151-3p88.7172NM_001201329
PPP1R3Bhsa-miR-6747-3p88.6969NM_001201329
PPP1R3Bhsa-miR-147b-5p88.3193NM_001201329
PPP1R3Bhsa-miR-464488.0853NM_001201329
PPP1R3Bhsa-miR-1288-5p87.4506NM_001201329
PPP1R3Bhsa-miR-4661-3p86.4588NM_001201329
PPP1R3Bhsa-miR-426286.3673NM_001201329
PPP1R3Bhsa-miR-316386.194NM_001201329
PPP1R3Bhsa-miR-3190-3p86.1318NM_001201329
PPP1R3Bhsa-miR-365886.0643NM_001201329
PPP1R3Bhsa-miR-452285.6821NM_001201329
PPP1R3Bhsa-miR-185-5p85.5538NM_001201329
PPP1R3Bhsa-miR-427685.0842NM_001201329
PPP1R3Bhsa-miR-3140-3p84.3244NM_001201329
PPP1R3Bhsa-miR-4715-3p84.1959NM_001201329
PPP1R3Bhsa-miR-57783.9753NM_001201329
PPP1R3Bhsa-miR-797383.1294NM_001201329
PPP1R3Bhsa-miR-60783.0142NM_001201329
PPP1R3Bhsa-miR-519a-3p82.8052NM_001201329
PPP1R3Bhsa-miR-519c-3p82.8052NM_001201329
PPP1R3Bhsa-miR-519b-3p82.8052NM_001201329
PPP1R3Bhsa-miR-205-3p82.7989NM_001201329
PPP1R3Bhsa-miR-5197-3p82.5133NM_001201329
PPP1R3Bhsa-miR-146a-3p82.4492NM_001201329
PPP1R3Bhsa-miR-6871-3p82.401NM_001201329
PPP1R3Bhsa-miR-548ba82.3621NM_001201329
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Motifs and transcription factors (TFs) regulating PPP1R3B

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PPP1R3Bmetacluster_135.11NR2C2 (directAnnotation).
PPP1R3Bmetacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
PPP1R3Bmetacluster_144.3ZNF704; ZNF704 (directAnnotation).
PPP1R3Bmetacluster_7.13ZFX (directAnnotation).
PPP1R3Bkznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
PPP1R3Bcisbp__M00968MTF2 (directAnnotation).
PPP1R3Bmetacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
PPP1R3Bmetacluster_160.20JUND; PRDM15 (directAnnotation).
PPP1R3Bcisbp__M00341PAX6 (directAnnotation).
PPP1R3Bmetacluster_198.3ZFP64 (directAnnotation).
PPP1R3Bmetacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
PPP1R3Bjaspar__MA0185.1DEAF1 (inferredBy_Orthology).
PPP1R3Bmetacluster_61.1DEAF1; DEAF1 (directAnnotation).
PPP1R3Bcisbp__M00788ZFY (inferredBy_Orthology).
PPP1R3Bkznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
PPP1R3Bmetacluster_175.1ZNF283 (directAnnotation).
PPP1R3Bhdpi__ZNF304ZNF304 (directAnnotation).
PPP1R3Btransfac_pro__M02844BCL6B (inferredBy_Orthology).
PPP1R3Bmetacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
PPP1R3Bmetacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
PPP1R3Btransfac_pro__M01199TRIM28 (directAnnotation).
PPP1R3Bkznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
PPP1R3Bmetacluster_151.2ZNF23 (directAnnotation).
PPP1R3Btransfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
PPP1R3Btransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
PPP1R3Btransfac_pro__M03806ZBTB7C (directAnnotation).
PPP1R3Btransfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."