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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: PPBP

Summary for PPBP

Gene informationGene symbol

PPBP

Ensembl ID

ENSG00000163736

Entrez ID

5473

Gene namepro-platelet basic protein
Synonymsb-TG1|Beta-TG|CTAP3|CTAPIII|CXCL7|LA-PF4|LDGF|MDGF|NAP-2|NAP-2-L1|PBP|SCYB7|TGB|TGB1|THBGB1
Gene typeprotein_coding
UniProtAcc

P02775


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Dataset with differentially expressed gene: PPBP

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelprepDCs-1.400783.37e-04

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelprePlasma cells-0.7308783.85e-05

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelprecDCs-0.8160772.92e-37

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreMono/Macro-0.744320.00e+00

GSE162117

patientsPeripheral blood mononuclear cellsAcute myeloid leukemiaTefractory acute myeloid leukemia (AML)Targeted therapyficlatuzumabpostcDCs0.5058033.85e-16

GSE162117

patientsPeripheral blood mononuclear cellsAcute myeloid leukemiaTefractory acute myeloid leukemia (AML)Targeted therapyficlatuzumabpostCD8+ T cells0.5583626.58e-09

GSE162117

patientsPeripheral blood mononuclear cellsAcute myeloid leukemiaTefractory acute myeloid leukemia (AML)Targeted therapyficlatuzumabpostNK cells0.7392763.30e-09

GSE162117

patientsPeripheral blood mononuclear cellsAcute myeloid leukemiaTefractory acute myeloid leukemia (AML)Targeted therapyficlatuzumabpostCD4+ T cells1.452340.00e+00

GSE162117

patientsPeripheral blood mononuclear cellsAcute myeloid leukemiaTefractory acute myeloid leukemia (AML)Targeted therapyficlatuzumabpostErythrocytes1.045642.55e-02

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Expression of PPBP in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PPBP

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PPBP

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PPBPhsa-miR-5009-3p93.5978NM_002704
PPBPhsa-miR-3140-5p91.2452NM_002704
PPBPhsa-miR-629-5p87.9571NM_002704
PPBPhsa-miR-4524a-3p87.7277NM_002704
PPBPhsa-miR-3152-3p87.3155NM_002704
PPBPhsa-miR-4795-3p85.0755NM_002704
PPBPhsa-miR-6783-3p84.1188NM_002704
PPBPhsa-miR-146a-5p83.6731NM_002704
PPBPhsa-miR-146b-5p83.6731NM_002704
PPBPhsa-miR-7153-5p83.6731NM_002704
PPBPhsa-miR-366883.541NM_002704
PPBPhsa-miR-320a-5p82.4686NM_002704
PPBPhsa-miR-126782.3905NM_002704
PPBPhsa-miR-1343-3p82.2846NM_002704
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Motifs and transcription factors (TFs) regulating PPBP

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PPBPmetacluster_22.34BACH2 (directAnnotation).
PPBPtransfac_pro__M05636ZNF134; ZNF154; ZNF256; ZNF304; ZNF418; ZNF419; ZNF480; ZNF548; ZNF549; ZNF552; ZNF561; ZNF562; ZNF584; ZNF586; ZNF587B; ZNF610; ZNF772; ZNF773; ZNF792; ZNF793; ZNF837 (inferredBy_Orthology).
PPBPtransfac_pro__M01267FOSL1 (directAnnotation).
PPBPtransfac_pro__M03870FOSL2 (directAnnotation).
PPBPmetacluster_22.1MAFF (inferredBy_Orthology).
PPBPmetacluster_137.2ATF3; BACH2; BATF; BATF; BATF; BATF; BATF3; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOSB; FOSB; FOSB; FOSB; FOSB; FOSL1; FOSL1; FOSL1; FOSL1; FOSL1; FOSL2; FOSL2; FOSL2; FOSL2; FOSL2; FOSL2; FOSL2; INSM2; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUNB; JUNB; JUNB; JUNB; JUNB; JUND; JUND; JUND; JUND; JUND; SMARCC1 (directAnnotation). ATF3; ATF3; BATF; FOS; FOSB; FOSL1; FOSL1; FOSL2; FOSL2; FOSL2; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUNB; JUND; JUND; JUND; JUND (inferredBy_Orthology).
PPBPmetacluster_22.28BACH1 (directAnnotation).
PPBPmetacluster_22.30NFE2L2 (directAnnotation).
PPBPmetacluster_22.25NFE2L2 (directAnnotation).
PPBPmetacluster_29.1STAT4; STAT5A; STAT5A; STAT5B (directAnnotation). STAT5B; STAT5B (inferredBy_Orthology).
PPBPtransfac_pro__M05592FIZ1 (directAnnotation).
PPBPtfdimers__MD00433NKX3-2; ZNF217 (directAnnotation).
PPBPtransfac_pro__M06830ZNF528 (directAnnotation).
PPBPjaspar__MA0136.3ELF5 (inferredBy_Orthology).
PPBPtaipale_tf_pairs__TEAD4_FLI1_RCCGGAAATRSY_CAPFLI1; TEAD4 (directAnnotation).
PPBPtaipale_tf_pairs__TEAD4_ERG_RSCGGAAATRCC_CAPERG; TEAD4 (directAnnotation).
PPBPmetacluster_12.2MAF; MAFA; MAFA; MAFF; MAFF; MAFF; MAFG; MAFG; MAFG; MAFK; MAFK; MAFK; MAFK; NRL; NRL; NRL; NRL; NRL (directAnnotation). MAF; MAF; MAFA; MAFA; MAFB; MAFB; MAFB; MAFB; MAFF; MAFF; MAFG; MAFG; MAFK; MAFK; NRL; NRL (inferredBy_Orthology).
PPBPtransfac_pro__M00326PAX1 (directAnnotation).
PPBPtransfac_pro__M05972ZNF701 (directAnnotation).
PPBPmetacluster_85.10ZNF585B; ZNF586 (directAnnotation).
PPBPjaspar__MA1935.1FOXI1 (directAnnotation).
PPBPtfdimers__MD00392E2F1; NKX2-1 (directAnnotation).
PPBPtfdimers__MD00581ATF5; NKX3-2 (directAnnotation).
PPBPtransfac_pro__M05952ZNF672 (inferredBy_Orthology).
PPBPmetacluster_30.2MAF; MAF; MAFA; MAFB; MAFF; MAFF; MAFF; MAFF; MAFF; MAFF; MAFG; MAFG; MAFG; MAFG; MAFG; MAFG; MAFK; MAFK; MAFK; MAFK; MAFK; MAFK; MAFK; ZNF547; ZNF547 (directAnnotation). MAF; MAF; MAFA; MAFA; MAFA; MAFB; MAFB; MAFB; MAFB; MAFB; MAFF; MAFF; MAFF; MAFG; MAFG; MAFK; MAFK; MAFK; MAFK; MAFK; MAFK; NRL; NRL (inferredBy_Orthology).
PPBPhocomoco__SPDEF_HUMAN.H11MO.0.DSPDEF (directAnnotation).
PPBPtransfac_pro__M05627ZNF320 (directAnnotation).
PPBPmetacluster_79.34GATA2; GATA5 (directAnnotation).
PPBPtfdimers__MD00302IRF7; IRF8 (directAnnotation).
PPBPtransfac_pro__M05317SOX30 (directAnnotation).
PPBPtaipale_tf_pairs__CEBPG_ELF1_TTGCGYAANNSCGGAAGN_CAP_reprCEBPG; ELF1 (directAnnotation).
PPBPmetacluster_155.17PRDM14; ZNF264 (directAnnotation). PRDM14 (inferredBy_Orthology).
PPBPkznf__ZNF443_Imbeault2017_RP_RCADEZNF443 (directAnnotation).
PPBPtransfac_pro__M06692PRDM10 (directAnnotation).
PPBPswissregulon__mm__Zbtb12ZBTB12 (inferredBy_Orthology).
PPBPtfdimers__MD00349GABPA; YY2 (directAnnotation).
PPBPtfdimers__MD00351IRF8; RFX1; RFX2; RFX3; RFX4; RFX5; RFXANK; RFXAP (directAnnotation).
PPBPswissregulon__mm__MafgMAFG (inferredBy_Orthology).
PPBPtransfac_pro__M06869ZNF600 (directAnnotation).
PPBPtransfac_pro__M06093ZNF17 (directAnnotation).
PPBPtransfac_pro__M06025ZNF195 (directAnnotation).
PPBPtaipale_tf_pairs__TEAD4_FOXI1_RCATWCCNNNNNNNNNNNNRTMAACA_CAP_reprFOXI1; TEAD4 (directAnnotation).
PPBPtransfac_pro__M02095FOSL1 (directAnnotation).
PPBPtransfac_pro__M06009ZNF175 (directAnnotation).
PPBPtransfac_pro__M06550ZNF519 (directAnnotation).
PPBPtransfac_pro__M06613ZNF514 (directAnnotation).
PPBPtransfac_pro__M06966E4F1 (inferredBy_Orthology).
PPBPmetacluster_137.5FOS; FOS; FOS; FOSB; FOSL1; FOSL1; FOSL2; FOSL2; JUN; JUNB; JUNB; JUND; JUND (directAnnotation). JUN (inferredBy_Orthology).
PPBPtransfac_pro__M02269FEV (directAnnotation).
PPBPtransfac_pro__M06603ZNF560 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
PPBP"Copper"

DB09130

small molecule
PPBP"Ethanesulfonic acid"

DB03635

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."