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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene (This gene does not contain this module)

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: POMGNT1

Summary for POMGNT1

Gene informationGene symbol

POMGNT1

Ensembl ID

ENSG00000085998

Entrez ID

55624

Gene nameprotein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)
SynonymsFLJ20277|LGMD2O|MEB|MGAT1.2
Gene typeprotein_coding
UniProtAcc

Q8WZA1


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Dataset with differentially expressed gene: POMGNT1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.8811040.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3319161.71e-34

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Expression of POMGNT1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to POMGNT1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating POMGNT1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
POMGNT1hsa-miR-3121-3p98.6965NM_017739
POMGNT1hsa-miR-4638-3p94.8943NM_017739
POMGNT1hsa-miR-95-5p93.9646NM_017739
POMGNT1hsa-miR-3184-3p92.6949NM_017739
POMGNT1hsa-miR-392189.4676NM_017739
POMGNT1hsa-miR-4653-5p89.4676NM_017739
POMGNT1hsa-miR-5586-5p87.5914NM_001290129
POMGNT1hsa-miR-430387.3907NM_017739
POMGNT1hsa-miR-128384.5331NM_017739
POMGNT1hsa-miR-120084.4936NM_017739
POMGNT1hsa-miR-593-3p83.6403NM_017739
POMGNT1hsa-miR-426782.2161NM_017739
POMGNT1hsa-miR-6748-3p81.0708NM_001290129
POMGNT1hsa-miR-3664-3p80.8929NM_017739
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Motifs and transcription factors (TFs) regulating POMGNT1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."