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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: PNP

Summary for PNP

Gene informationGene symbol

PNP

Ensembl ID

ENSG00000198805

Entrez ID

4860

Gene namepurine nucleoside phosphorylase
SynonymsNP|PUNP
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: PNP

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostcDCs0.3371653.07e-02

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostMono/Macro0.4919033.08e-43

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostB cells0.2565561.40e-11

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreCD8+ T cells0.3020050.00e+00

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro-0.5851670.00e+00

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.3515750.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes0.5826650.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.2789950.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreErythrocytes0.3272412.21e-07

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.2950288.40e-18

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.312756.16e-11

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.2911231.83e-12

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells-0.2788294.78e-07

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.2518976.23e-12

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Expression of PNP in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PNP

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PNP

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PNPhsa-miR-4668-3p91.4358NM_000270
PNPhsa-miR-426790.9429NM_000270
PNPhsa-miR-447190.8818NM_000270
PNPhsa-miR-684486.9301NM_000270
PNPhsa-miR-430686.4439NM_000270
PNPhsa-miR-185-5p84.8838NM_000270
PNPhsa-miR-805982.3967NM_000270
PNPhsa-miR-429982.2497NM_000270
PNPhsa-miR-1236-3p82.228NM_000270
PNPhsa-miR-6755-3p82.015NM_000270
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Motifs and transcription factors (TFs) regulating PNP

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PNPtfdimers__MD00276IRF1; STAT6 (directAnnotation).
PNPmetacluster_127.3FOXO1; FOXO3; FOXO4 (directAnnotation).
PNPtaipale_tf_pairs__ETV5_HOXA2_RSCGGWAATKR_CAPETV5; HOXA2 (directAnnotation).
PNPtaipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
PNPtaipale_tf_pairs__ETV5_EVX1_RSCGGWAATKR_CAPETV5; EVX1 (directAnnotation).
PNPjaspar__MA1708.1ETV7 (directAnnotation).
PNPmetacluster_57.3ARNT; ATF3; ATF3; ATF3; ATF3; BHLHE40; BHLHE40; BHLHE40; BHLHE41; BHLHE41; BHLHE41; MITF; MITF; MITF; MLX; MLXIPL; SREBF1; SREBF1; SREBF1; SREBF1; SREBF2; SREBF2; SREBF2; TFE3; TFEC; USF1; USF1; USF1; USF1; USF1; USF1; USF1; USF1; USF1; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; ZNF507 (directAnnotation). ARNTL; BHLHE40; BHLHE40; BHLHE41; HELT; HES1; HES2; HES3; HES5; HES6; HES7; HEY1; HEY2; HEYL; MLX; MLX; SREBF1; SREBF2; TFE3; USF1; USF1; USF2; USF2 (inferredBy_Orthology).
PNPmetacluster_174.3MBD2; NFYA; NFYB; NFYC; PBX3 (directAnnotation).
PNPtaipale_tf_pairs__MEIS1_ELF1_NTGCCGGAAGTN_CAP_reprELF1; MEIS1 (directAnnotation).
PNPhdpi__FLI1FLI1 (directAnnotation).
PNPtransfac_pro__M00492STAT1 (directAnnotation).
PNPmetacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
PNPmetacluster_174.6NFYA; NFYB; NFYB; NFYC (directAnnotation).
PNPjaspar__MA0502.2NFYB (directAnnotation).
PNPtaipale_tf_pairs__ETV2_HES7_RSCGGAANNNNNNNCACGTGNN_CAP_reprETV2; HES7 (directAnnotation).
PNPcisbp__M00808MYPOP (inferredBy_Orthology).
PNPmetacluster_2.8IRF4; IRF5; IRF6; IRF9 (directAnnotation). IRF3; IRF5; IRF5; IRF6 (inferredBy_Orthology).
PNPmetacluster_167.7IRF8 (inferredBy_Orthology).
PNPtransfac_pro__M06952BATF (directAnnotation).
PNPtaipale_tf_pairs__ERF_MAX_RSCGGAANCACGTGN_CAP_reprERF; MAX (directAnnotation).
PNPtfdimers__MD00554CUX1; EP300 (directAnnotation).
PNPmetacluster_150.4SKOR1; SKOR1; SKOR2; SKOR2 (directAnnotation).
PNPtransfac_pro__M05542SNAPC4 (directAnnotation).
PNPtransfac_pro__M05612ZNF189 (directAnnotation).
PNPhomer__NANTGCSGCA_Zfp57ZFP57 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
PNP"(2S,3R,4S,5S)-3,4-Dihydroxy-2-[(methylsulfanyl)methyl]-5-(4-oxo-4,5-dihydro-1H-pyrrolo[3,2-d]pyrimi

DB03881

small molecule
PNP"(3R,4R)-3-Hydroxy-4-(hydroxymethyl)-1-[(4-oxo-4,4a,5,7a-tetrahydro-3H-pyrrolo[3,2-d]pyrimidin-7-yl)

DB03551

small molecule
PNP"2,6-Diamino-(S)-9-[2-(Phosphonomethoxy)Propyl]Purine"

DB02222

small molecule
PNP"2-Amino-7-[2-(2-Hydroxy-1-Hydroxymethyl-Ethylamino)-Ethyl]-1,7-Dihydro-Purin-6-One"

DB02391

small molecule
PNP"3'-deoxyguanosine"

DB03609

small molecule
PNP"8-azaguanine"

DB01667

small molecule
PNP"9-(5,5-Difluoro-5-Phosphonopentyl)Guanine"

DB04260

small molecule
PNP"9-deazainosine"

DB02796

small molecule
PNP"9-DEAZAINOSINE-2',3'-O-ETHYLIDENEPHOSPHONATE"

DB04753

small molecule
PNP"Cladribine"

DB00242

small molecule
PNP"Didanosine"

DB00900

small molecule
PNP"Forodesine"

DB06185

small molecule
PNP"Guanine"

DB02377

small molecule
PNP"Guanosine"

DB02857

small molecule
PNP"GUANOSINE-2',3'-O-ETHYLIDENEPHOSPHONATE"

DB04754

small molecule
PNP"GUANOSINE-2',3'-O-METHYLIDENEPHOSPHONATE"

DB04757

small molecule
PNP"Hypoxanthine"

DB04076

small molecule
PNP"Immucillin-G"

DB02230

small molecule
PNP"Inosine"

DB04335

small molecule
PNP"Peldesine"

DB02568

small molecule
PNP"Ribose-1-Phosphate"

DB03101

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."