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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PMS1

Summary for PMS1

Gene informationGene symbol

PMS1

Ensembl ID

ENSG00000064933

Entrez ID

5378

Gene namePMS1 homolog 1, mismatch repair system component
SynonymsMLH2|PMSL1
Gene typeprotein_coding
UniProtAcc

P54277


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Dataset with differentially expressed gene: PMS1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.3373223.27e-23

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Expression of PMS1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PMS1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PMS1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PMS1hsa-miR-316398.761NM_001321049
PMS1hsa-miR-4778-3p96.4052NM_001321049
PMS1hsa-miR-4799-5p95.2365NM_001321049
PMS1hsa-miR-4738-3p95.2317NM_001321049
PMS1hsa-miR-397393.9268NM_001321049
PMS1hsa-miR-94493.8498NM_001321049
PMS1hsa-miR-430793.3285NM_001321049
PMS1hsa-miR-365892.7572NM_001321049
PMS1hsa-miR-3664-3p89.4991NM_001321049
PMS1hsa-miR-130389.3327NM_001321051
PMS1hsa-miR-95-5p89.2212NM_001321049
PMS1hsa-miR-126-5p88.8809NM_001321051
PMS1hsa-miR-140-3p86.5645NM_001321049
PMS1hsa-miR-548ar-3p85.1015NM_001321049
PMS1hsa-miR-6888-5p84.6718NM_001321051
PMS1hsa-miR-447884.2652NM_001321049
PMS1hsa-miR-397784.2094NM_001321049
PMS1hsa-miR-2681-5p84.2094NM_001321049
PMS1hsa-miR-524-5p84.1289NM_000534
PMS1hsa-miR-520d-5p84.1289NM_000534
PMS1hsa-miR-390883.6056NM_001321049
PMS1hsa-miR-642b-3p83.3072NM_000534
PMS1hsa-miR-642a-3p83.3072NM_000534
PMS1hsa-miR-548az-3p82.9472NM_001321049
PMS1hsa-miR-548a-3p82.9472NM_001321049
PMS1hsa-miR-548e-3p82.9472NM_001321049
PMS1hsa-miR-548f-3p82.9472NM_001321049
PMS1hsa-miR-548bc82.9472NM_001321049
PMS1hsa-miR-548av-3p82.2162NM_001321049
PMS1hsa-miR-6834-5p81.7153NM_001321049
PMS1hsa-miR-428481.0387NM_001321051
PMS1hsa-miR-548d-3p80.7959NM_001321049
PMS1hsa-miR-548h-3p80.7959NM_001321049
PMS1hsa-miR-548z80.7959NM_001321049
PMS1hsa-miR-548ac80.7959NM_001321049
PMS1hsa-miR-548bb-3p80.7959NM_001321049
PMS1hsa-miR-7-2-3p80.4808NM_001321049
PMS1hsa-miR-7-1-3p80.4808NM_001321049
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Motifs and transcription factors (TFs) regulating PMS1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PMS1metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
PMS1cisbp__M02645ETS1 (directAnnotation).
PMS1hdpi__ETV4ETV4 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."