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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene (This gene does not contain this module)

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PLPBP

Summary for PLPBP

Gene informationGene symbol

PLPBP

Ensembl ID

ENSG00000147471

Entrez ID

11212

Gene namepyridoxal phosphate binding protein
SynonymsPROSC
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: PLPBP

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.5452870.00e+00

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Expression of PLPBP in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PLPBP

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PLPBP

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PLPBPhsa-miR-875-3p96.7869NM_007198
PLPBPhsa-miR-477593.0367NM_007198
PLPBPhsa-miR-1304-3p90.4978NM_007198
PLPBPhsa-miR-477090.4292NM_007198
PLPBPhsa-miR-143-3p90.4292NM_007198
PLPBPhsa-miR-302f89.767NM_007198
PLPBPhsa-miR-153-5p89.0226NM_007198
PLPBPhsa-miR-1271-3p88.9804NM_007198
PLPBPhsa-miR-550a-5p88.9804NM_007198
PLPBPhsa-miR-550a-3-5p88.9804NM_007198
PLPBPhsa-miR-520f-5p88.9451NM_007198
PLPBPhsa-miR-608887.6173NM_007198
PLPBPhsa-miR-939-3p86.1767NM_007198
PLPBPhsa-miR-490-3p85.9363NM_007198
PLPBPhsa-miR-205285.1106NM_007198
PLPBPhsa-miR-6515-3p84.8131NM_007198
PLPBPhsa-miR-33a-3p84.756NM_007198
PLPBPhsa-miR-135b-3p81.8311NM_007198
PLPBPhsa-miR-135a-2-3p81.8311NM_007198
PLPBPhsa-miR-7151-3p80.8937NM_007198
PLPBPhsa-miR-11181-3p80.3522NM_007198
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Motifs and transcription factors (TFs) regulating PLPBP

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."