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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PLEKHF2

Summary for PLEKHF2

Gene informationGene symbol

PLEKHF2

Ensembl ID

ENSG00000175895

Entrez ID

79666

Gene namepleckstrin homology and FYVE domain containing 2
SynonymsFLJ13187|PHAFIN2|ZFYVE18
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: PLEKHF2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.252541.46e-39

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.303080.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.6527661.21e-36

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Expression of PLEKHF2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PLEKHF2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PLEKHF2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PLEKHF2hsa-miR-520d-5p98.0942NM_024613
PLEKHF2hsa-miR-524-5p98.0942NM_024613
PLEKHF2hsa-miR-7157-3p97.5583NM_024613
PLEKHF2hsa-miR-6737-3p97.5583NM_024613
PLEKHF2hsa-miR-60796.9967NM_024613
PLEKHF2hsa-miR-5008-3p96.7137NM_024613
PLEKHF2hsa-miR-58796.6741NM_024613
PLEKHF2hsa-miR-364996.4979NM_024613
PLEKHF2hsa-miR-6715a-3p95.2132NM_024613
PLEKHF2hsa-miR-3679-3p94.6923NM_024613
PLEKHF2hsa-miR-10794.4308NM_024613
PLEKHF2hsa-miR-103a-3p94.4308NM_024613
PLEKHF2hsa-miR-1212394.0327NM_024613
PLEKHF2hsa-miR-3688-3p93.9165NM_024613
PLEKHF2hsa-miR-218-5p93.2919NM_024613
PLEKHF2hsa-miR-6740-5p93.2019NM_024613
PLEKHF2hsa-miR-1277-5p91.752NM_024613
PLEKHF2hsa-miR-5582-5p90.7239NM_024613
PLEKHF2hsa-miR-32-3p89.9912NM_024613
PLEKHF2hsa-miR-124-3p89.648NM_024613
PLEKHF2hsa-miR-506-3p89.648NM_024613
PLEKHF2hsa-miR-3663-3p89.3953NM_024613
PLEKHF2hsa-miR-182789.0297NM_024613
PLEKHF2hsa-miR-199b-5p88.4351NM_024613
PLEKHF2hsa-miR-199a-5p88.4351NM_024613
PLEKHF2hsa-miR-380-5p88.2061NM_024613
PLEKHF2hsa-miR-56388.176NM_024613
PLEKHF2hsa-miR-7849-3p87.911NM_024613
PLEKHF2hsa-miR-593-5p87.2216NM_024613
PLEKHF2hsa-miR-9851-3p87.2216NM_024613
PLEKHF2hsa-miR-892c-5p86.7272NM_024613
PLEKHF2hsa-miR-4524b-3p86.1164NM_024613
PLEKHF2hsa-miR-3942-3p85.7205NM_024613
PLEKHF2hsa-miR-550a-3p85.2028NM_024613
PLEKHF2hsa-miR-200c-5p85.1535NM_024613
PLEKHF2hsa-miR-616-5p84.731NM_024613
PLEKHF2hsa-miR-373-5p84.731NM_024613
PLEKHF2hsa-miR-371b-5p84.731NM_024613
PLEKHF2hsa-miR-3065-5p84.6406NM_024613
PLEKHF2hsa-miR-314884.5375NM_024613
PLEKHF2hsa-miR-4694-3p84.4717NM_024613
PLEKHF2hsa-miR-549a-3p83.6675NM_024613
PLEKHF2hsa-miR-1468-3p83.667NM_024613
PLEKHF2hsa-miR-3140-5p83.4012NM_024613
PLEKHF2hsa-miR-3613-3p83.0978NM_024613
PLEKHF2hsa-miR-130582.0968NM_024613
PLEKHF2hsa-miR-392480.6335NM_024613
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Motifs and transcription factors (TFs) regulating PLEKHF2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PLEKHF2metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
PLEKHF2dbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
PLEKHF2metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
PLEKHF2metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
PLEKHF2taipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
PLEKHF2taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
PLEKHF2taipale_tf_pairs__ERF_HES7_NNCACGTGNNNNCCGGAANN_CAP_reprERF; HES7 (directAnnotation).
PLEKHF2metacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
PLEKHF2taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
PLEKHF2transfac_pro__M00652NRF1 (directAnnotation).
PLEKHF2hdpi__ETV4ETV4 (directAnnotation).
PLEKHF2taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
PLEKHF2transfac_pro__M04866HDAC2 (directAnnotation).
PLEKHF2jaspar__MA1122.1TFDP1 (directAnnotation).
PLEKHF2metacluster_34.1ZNF143; ZNF143; ZNF143; ZNF76; ZNF76; ZNF76 (directAnnotation).
PLEKHF2swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
PLEKHF2metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
PLEKHF2metacluster_135.11NR2C2 (directAnnotation).
PLEKHF2metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
PLEKHF2tfdimers__MD00038TFAP2C (directAnnotation).
PLEKHF2metacluster_144.3ZNF704; ZNF704 (directAnnotation).
PLEKHF2metacluster_7.13ZFX (directAnnotation).
PLEKHF2kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
PLEKHF2cisbp__M00968MTF2 (directAnnotation).
PLEKHF2metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
PLEKHF2metacluster_160.20JUND; PRDM15 (directAnnotation).
PLEKHF2cisbp__M00341PAX6 (directAnnotation).
PLEKHF2metacluster_198.3ZFP64 (directAnnotation).
PLEKHF2metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
PLEKHF2metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
PLEKHF2jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
PLEKHF2metacluster_61.1DEAF1; DEAF1 (directAnnotation).
PLEKHF2cisbp__M00788ZFY (inferredBy_Orthology).
PLEKHF2kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
PLEKHF2metacluster_175.1ZNF283 (directAnnotation).
PLEKHF2hdpi__ZNF304ZNF304 (directAnnotation).
PLEKHF2transfac_pro__M02844BCL6B (inferredBy_Orthology).
PLEKHF2metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
PLEKHF2metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
PLEKHF2transfac_pro__M01199TRIM28 (directAnnotation).
PLEKHF2kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
PLEKHF2metacluster_151.2ZNF23 (directAnnotation).
PLEKHF2transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
PLEKHF2transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
PLEKHF2transfac_pro__M03806ZBTB7C (directAnnotation).
PLEKHF2transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
PLEKHF2hdpi__NRLNRL (directAnnotation).
PLEKHF2flyfactorsurvey__Mad_FlyReg_FBgn0011648SMAD9 (inferredBy_Orthology).
PLEKHF2metacluster_141.6MZF1; TAF1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZNF597 (directAnnotation). TAF1; TAF1L (inferredBy_Orthology).
PLEKHF2hdpi__FEZF2FEZF2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."