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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PKP1

Summary for PKP1

Gene informationGene symbol

PKP1

Ensembl ID

ENSG00000081277

Entrez ID

5317

Gene nameplakophilin 1
SynonymsB6P
Gene typeprotein_coding
UniProtAcc

Q13835


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Dataset with differentially expressed gene: PKP1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells-0.2518297.46e-08

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Expression of PKP1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PKP1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PKP1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PKP1hsa-miR-489-3p94.2152NM_000299
PKP1hsa-miR-4789-5p92.1213NM_000299
PKP1hsa-miR-874-5p90.1325NM_000299
PKP1hsa-miR-10527-5p87.0515NM_000299
PKP1hsa-miR-6764-5p86.9726NM_000299
PKP1hsa-miR-428386.4999NM_000299
PKP1hsa-miR-239286.2837NM_000299
PKP1hsa-miR-1915-5p85.6028NM_000299
PKP1hsa-miR-314884.1297NM_000299
PKP1hsa-miR-1915-3p83.5072NM_000299
PKP1hsa-miR-499a-3p83.4634NM_000299
PKP1hsa-miR-499b-3p83.4634NM_000299
PKP1hsa-miR-432881.824NM_000299
PKP1hsa-miR-6769a-3p81.5786NM_000299
PKP1hsa-miR-7106-5p80.0739NM_000299
PKP1hsa-miR-4731-5p80.036NM_000299
PKP1hsa-miR-3913-3p80.0197NM_000299
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Motifs and transcription factors (TFs) regulating PKP1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PKP1transfac_pro__M04950EGR1 (directAnnotation).
PKP1transfac_pro__M04913ZBTB7A (directAnnotation).
Page: 1

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."