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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PHF6

Summary for PHF6

Gene informationGene symbol

PHF6

Ensembl ID

ENSG00000156531

Entrez ID

84295

Gene namePHD finger protein 6
SynonymsBFLS|BORJ|CENP-31|KIAA1823|MGC14797
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: PHF6

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells0.2773363.14e-16

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.2798940.00e+00

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.2614264.09e-10

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Expression of PHF6 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PHF6

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PHF6

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PHF6hsa-miR-873-5p98.5538NM_001015877
PHF6hsa-miR-216a-3p98.501NM_032458
PHF6hsa-miR-3681-3p98.501NM_032458
PHF6hsa-miR-128-3p98.501NM_032458
PHF6hsa-miR-889-3p98.3339NM_032458
PHF6hsa-miR-4799-5p98.1301NM_001015877
PHF6hsa-miR-449597.8584NM_032458
PHF6hsa-miR-570-3p96.8258NM_032458
PHF6hsa-miR-153-5p95.7372NM_032458
PHF6hsa-miR-568895.2231NM_001015877
PHF6hsa-miR-124494.9738NM_001015877
PHF6hsa-miR-676-5p94.1905NM_032458
PHF6hsa-miR-651-3p94.1393NM_001015877
PHF6hsa-miR-3682-5p94.1056NM_032458
PHF6hsa-miR-129793.9541NM_032458
PHF6hsa-miR-6868-3p93.8689NM_032458
PHF6hsa-miR-495-3p93.8406NM_001015877
PHF6hsa-miR-608893.7367NM_032458
PHF6hsa-miR-569693.5964NM_032458
PHF6hsa-miR-143-3p93.4056NM_032458
PHF6hsa-miR-477093.4056NM_032458
PHF6hsa-miR-203a-3p93.2156NM_001015877
PHF6hsa-miR-4776-3p92.7488NM_032458
PHF6hsa-miR-203b-5p92.6603NM_032458
PHF6hsa-miR-6718-5p92.6603NM_032458
PHF6hsa-miR-548c-3p92.6256NM_032458
PHF6hsa-miR-561-3p92.112NM_001015877
PHF6hsa-miR-10399-5p92.1042NM_032458
PHF6hsa-miR-452-5p90.7134NM_032458
PHF6hsa-miR-6885-3p90.4811NM_001015877
PHF6hsa-miR-5590-5p90.4128NM_001015877
PHF6hsa-miR-806390.2256NM_032458
PHF6hsa-miR-6504-3p90.1395NM_032458
PHF6hsa-miR-62390.1012NM_032458
PHF6hsa-miR-892c-3p90.037NM_032458
PHF6hsa-miR-4676-3p90.037NM_032458
PHF6hsa-miR-478090.0185NM_032458
PHF6hsa-miR-26a-5p89.8755NM_032458
PHF6hsa-miR-26b-5p89.8755NM_032458
PHF6hsa-miR-377-3p89.8581NM_001015877
PHF6hsa-miR-34b-5p89.4865NM_001015877
PHF6hsa-miR-449c-5p89.4865NM_001015877
PHF6hsa-miR-186-5p89.4111NM_001015877
PHF6hsa-miR-455-3p88.1885NM_001015877
PHF6hsa-miR-2682-5p88.0243NM_001015877
PHF6hsa-miR-1-3p87.9634NM_032458
PHF6hsa-miR-20687.9634NM_032458
PHF6hsa-miR-61387.9634NM_032458
PHF6hsa-miR-183-5p87.618NM_032458
PHF6hsa-miR-4708-5p87.5715NM_032458
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Motifs and transcription factors (TFs) regulating PHF6

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PHF6metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
PHF6taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
PHF6metacluster_174.3MBD2; NFYA; NFYB; NFYC; PBX3 (directAnnotation).
PHF6metacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
PHF6metacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
PHF6swissregulon__hs__ELF2ELF2 (directAnnotation).
PHF6swissregulon__mm__E2f7E2F7 (inferredBy_Orthology).
PHF6transfac_pro__M04826EP300 (directAnnotation).
PHF6taipale_tf_pairs__MEIS1_ELF1_NTGCCGGAAGTN_CAP_reprELF1; MEIS1 (directAnnotation).
PHF6metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
PHF6taipale_tf_pairs__FOXO1_ELK3_RCCGGAWGTKKW_CAPELK3; FOXO1 (directAnnotation).
PHF6transfac_pro__M00652NRF1 (directAnnotation).
PHF6hdpi__ETV4ETV4 (directAnnotation).
PHF6dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
PHF6metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
PHF6hdpi__ELF2ELF2 (directAnnotation).
PHF6swissregulon__hs__ELK1ELK1 (directAnnotation).
PHF6taipale_tf_pairs__FOXO1_ELK1_TGTTGCCGGANNN_CAPELK1; FOXO1 (directAnnotation).
PHF6taipale_tf_pairs__ETV5_EOMES_TNRCACCGGAWN_CAPEOMES; ETV5 (directAnnotation).
PHF6metacluster_183.4ETS1 (inferredBy_Orthology).
PHF6taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
PHF6transfac_pro__M02089E2F3 (directAnnotation).
PHF6transfac_pro__M02898SMAD3 (directAnnotation).
PHF6metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
PHF6metacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
PHF6metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
PHF6transfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
PHF6hdpi__HIP2UBE2K (directAnnotation).
PHF6hdpi__NRLNRL (directAnnotation).
PHF6transfac_pro__M00430E2F1 (directAnnotation).
PHF6homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
PHF6homer__NANTGCSGCA_Zfp57ZFP57 (directAnnotation).
PHF6transfac_pro__M07329SP7 (directAnnotation).
PHF6metacluster_197.3E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F2; E2F2; E2F2; E2F2; E2F2; E2F3; E2F3; E2F3; E2F3; E2F3; E2F3; E2F3; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F5; E2F5; E2F5; E2F5; E2F6; E2F7; E2F7; E2F7; RB1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP2; TFDP2 (directAnnotation).
PHF6transfac_pro__M07397ZNF148 (directAnnotation).
PHF6transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
PHF6metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
PHF6cisbp__M07938E2F1 (directAnnotation).
PHF6hocomoco__EGR4_HUMAN.H11MO.0.DEGR4 (directAnnotation).
PHF6metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
PHF6transfac_pro__M07436WT1 (directAnnotation).
PHF6metacluster_3.14WT1; WT1 (directAnnotation).
PHF6transfac_pro__M01090SMAD9 (inferredBy_Orthology).
PHF6transfac_pro__M01837KLF11 (directAnnotation).
PHF6hocomoco__TYY2_HUMAN.H11MO.0.DYY2 (directAnnotation).
PHF6transfac_pro__M02844BCL6B (inferredBy_Orthology).
PHF6transfac_pro__M07310SP5 (directAnnotation).
PHF6taipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
PHF6metacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
PHF6transfac_pro__M04817ZBTB33 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."