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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PHF20L1

Summary for PHF20L1

Gene informationGene symbol

PHF20L1

Ensembl ID

ENSG00000129292

Entrez ID

51105

Gene namePHD finger protein 20 like 1
SynonymsCGI-72|FLJ13649|FLJ21615|MGC64923|TDRD20B
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: PHF20L1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelprecDCs0.2602743.63e-06

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Expression of PHF20L1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PHF20L1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PHF20L1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PHF20L1hsa-miR-208a-5p98.3211NM_001277196
PHF20L1hsa-miR-208b-5p98.3211NM_001277196
PHF20L1hsa-miR-5692a98.0948NM_198513
PHF20L1hsa-miR-806897.8652NM_001277196
PHF20L1hsa-miR-96-5p97.7898NM_001277196
PHF20L1hsa-miR-5582-3p97.5876NM_198513
PHF20L1hsa-miR-427797.5771NM_001277196
PHF20L1hsa-miR-1213397.557NM_001277196
PHF20L1hsa-miR-1271-5p97.557NM_001277196
PHF20L1hsa-miR-212-5p96.8272NM_001277196
PHF20L1hsa-miR-3689e96.6937NM_001277196
PHF20L1hsa-miR-3689a-5p96.6937NM_001277196
PHF20L1hsa-miR-3689b-5p96.6937NM_001277196
PHF20L1hsa-miR-3689f96.6937NM_001277196
PHF20L1hsa-miR-426296.3951NM_001277196
PHF20L1hsa-miR-548an96.2276NM_001277196
PHF20L1hsa-miR-513a-3p95.835NM_001277196
PHF20L1hsa-miR-513c-3p95.835NM_001277196
PHF20L1hsa-miR-5580-3p95.7827NM_001277196
PHF20L1hsa-miR-3606-3p95.6125NM_001277196
PHF20L1hsa-miR-129795.2541NM_001277196
PHF20L1hsa-miR-181b-5p95.0172NM_001277196
PHF20L1hsa-miR-181d-5p95.0172NM_001277196
PHF20L1hsa-miR-181c-5p95.0172NM_001277196
PHF20L1hsa-miR-181a-5p95.0172NM_001277196
PHF20L1hsa-miR-216a-5p94.4761NM_001277196
PHF20L1hsa-miR-392494.4349NM_001277196
PHF20L1hsa-miR-3145-3p94.3688NM_001277196
PHF20L1hsa-miR-502-5p94.2495NM_001277196
PHF20L1hsa-miR-4691-3p94.1379NM_001277196
PHF20L1hsa-miR-217-3p94.1073NM_001277196
PHF20L1hsa-miR-4762-3p93.8584NM_001277196
PHF20L1hsa-miR-7844-5p93.8098NM_001277196
PHF20L1hsa-miR-6513-3p93.5598NM_001277196
PHF20L1hsa-miR-453093.547NM_001277196
PHF20L1hsa-miR-26a-5p93.41NM_001277196
PHF20L1hsa-miR-26b-5p93.41NM_001277196
PHF20L1hsa-miR-548c-3p93.1547NM_001277196
PHF20L1hsa-miR-449b-3p92.8143NM_001277196
PHF20L1hsa-miR-548ar-3p92.1475NM_198513
PHF20L1hsa-miR-471991.9903NM_001277196
PHF20L1hsa-miR-446591.7441NM_001277196
PHF20L1hsa-miR-338-5p91.4795NM_198513
PHF20L1hsa-miR-708-3p91.3335NM_001277196
PHF20L1hsa-miR-509490.9992NM_001277196
PHF20L1hsa-miR-6515-3p90.7297NM_001277196
PHF20L1hsa-miR-338-3p90.4984NM_001277196
PHF20L1hsa-miR-6847-3p90.4862NM_001277196
PHF20L1hsa-miR-365990.4139NM_001277196
PHF20L1hsa-miR-6750-3p89.9637NM_198513
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Motifs and transcription factors (TFs) regulating PHF20L1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PHF20L1homer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
PHF20L1hdpi__GTF3C2GTF3C2 (directAnnotation).
PHF20L1transfac_pro__M03806ZBTB7C (directAnnotation).
PHF20L1metacluster_198.3ZFP64 (directAnnotation).
PHF20L1metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
PHF20L1kznf__ZNF441_Imbeault2017_RP_RCADEZNF441 (directAnnotation).
PHF20L1hdpi__NRLNRL (directAnnotation).
PHF20L1metacluster_144.3ZNF704; ZNF704 (directAnnotation).
PHF20L1tfdimers__MD00483ZBTB14 (directAnnotation).
PHF20L1metacluster_7.13ZFX (directAnnotation).
PHF20L1metacluster_126.7CTCF; ZFY; ZSCAN30 (directAnnotation).
PHF20L1jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."