DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene (This gene does not contain this module)

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor

leaf

Acts as a drug target< (This gene does not contain this module)

Gene: PHF20

Summary for PHF20

Gene informationGene symbol

PHF20

Ensembl ID

ENSG00000025293

Entrez ID

51230

Gene namePHD finger protein 20
SynonymsC20orf104|dJ1121G12.1|TDRD20A
Gene typeprotein_coding
UniProtAcc

Q9BVI0


Top

Dataset with differentially expressed gene: PHF20

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells0.7089715.41e-09

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.2594013.80e-04

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells-0.520520.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.388320.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.3804910.00e+00

Top

Expression of PHF20 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to PHF20

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

Top

MicroRNAs (miRNA) regulating PHF20

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PHF20hsa-miR-345-3p98.9004NM_016436
PHF20hsa-miR-454-3p97.4988NM_016436
PHF20hsa-miR-301a-3p96.8159NM_016436
PHF20hsa-miR-301b-3p96.8159NM_016436
PHF20hsa-miR-130a-3p96.8159NM_016436
PHF20hsa-miR-429596.8159NM_016436
PHF20hsa-miR-130b-3p96.8159NM_016436
PHF20hsa-miR-366696.8159NM_016436
PHF20hsa-miR-431995.4931NM_016436
PHF20hsa-miR-670-5p95.0724NM_016436
PHF20hsa-miR-427594.7783NM_016436
PHF20hsa-miR-450b-5p94.3755NM_016436
PHF20hsa-miR-891a-3p94.342NM_016436
PHF20hsa-miR-7850-5p93.738NM_016436
PHF20hsa-miR-469893.7107NM_016436
PHF20hsa-miR-6840-3p93.4675NM_016436
PHF20hsa-miR-125b-5p93.4584NM_016436
PHF20hsa-miR-125a-5p93.4584NM_016436
PHF20hsa-miR-2115-5p92.9787NM_016436
PHF20hsa-miR-152-3p92.8414NM_016436
PHF20hsa-miR-148b-3p92.8414NM_016436
PHF20hsa-miR-148a-3p92.8414NM_016436
PHF20hsa-miR-4732-3p92.3189NM_016436
PHF20hsa-miR-805790.9307NM_016436
PHF20hsa-miR-450a-1-3p90.5973NM_016436
PHF20hsa-miR-366289.3919NM_016436
PHF20hsa-miR-6875-3p88.3561NM_016436
PHF20hsa-miR-6504-3p87.8767NM_016436
PHF20hsa-miR-19b-2-5p85.9859NM_016436
PHF20hsa-miR-19a-5p85.9859NM_016436
PHF20hsa-miR-19b-1-5p85.9859NM_016436
PHF20hsa-miR-3121-3p85.9119NM_016436
PHF20hsa-miR-655-5p85.7832NM_016436
PHF20hsa-miR-1255b-2-3p85.3059NM_016436
PHF20hsa-miR-1211485.2311NM_016436
PHF20hsa-miR-313284.9819NM_016436
PHF20hsa-miR-10399-5p84.9127NM_016436
PHF20hsa-miR-376c-3p84.0734NM_016436
PHF20hsa-miR-397783.8847NM_016436
PHF20hsa-miR-182583.2294NM_016436
PHF20hsa-miR-196a-5p83.187NM_016436
PHF20hsa-miR-196b-5p83.187NM_016436
PHF20hsa-miR-26b-3p82.549NM_016436
PHF20hsa-miR-197-5p81.6205NM_016436
PHF20hsa-miR-6767-3p81.3067NM_016436
PHF20hsa-miR-137-3p80.8617NM_016436
PHF20hsa-miR-569380.7002NM_016436
PHF20hsa-miR-684480.2005NM_016436
PHF20hsa-miR-10780.0508NM_016436
PHF20hsa-miR-103a-3p80.0508NM_016436
Page: 1

Top

Motifs and transcription factors (TFs) regulating PHF20

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PHF20metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
PHF20hocomoco__KLF13_HUMAN.H11MO.0.DKLF13 (directAnnotation).
PHF20jaspar__MA0079.5SP1 (directAnnotation).
PHF20taipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
PHF20metacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
PHF20metacluster_3.14WT1; WT1 (directAnnotation).
PHF20metacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
PHF20taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
PHF20taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
PHF20metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
PHF20kznf__ZNF441_Imbeault2017_RP_RCADEZNF441 (directAnnotation).
PHF20jaspar__MA0748.2YY2 (directAnnotation).
PHF20kznf__ZBTB14_Schmitges2016_RCADEZBTB14 (directAnnotation).
Page: 1

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.
TFmotifExpressionCell typeDatasetTimepoint
PHF20metacluster_166.4downMalignant cells

GSE108397

NA
PHF20metacluster_166.4downMalignant cells

GSE186960

NA
Page: 1

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."