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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: PDHA1

Summary for PDHA1

Gene informationGene symbol

PDHA1

Ensembl ID

ENSG00000131828

Entrez ID

5160

Gene namepyruvate dehydrogenase E1 subunit alpha 1
SynonymsE1alpha|PDHA
Gene typeprotein_coding
UniProtAcc

P08559


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Dataset with differentially expressed gene: PDHA1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells-0.292360.00e+00

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells0.3468851.95e-25

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells0.3541590.00e+00

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.8901250.00e+00

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.9288130.00e+00

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.9461060.00e+00

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells-0.5994586.76e-29

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells0.7005840.00e+00

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Expression of PDHA1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PDHA1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PDHA1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PDHA1hsa-miR-4709-3p96.9287NM_001173454
PDHA1hsa-miR-568894.7352NM_001173454
PDHA1hsa-miR-548m94.1154NM_000284
PDHA1hsa-miR-1306-5p93.6379NM_001173454
PDHA1hsa-miR-570-5p93.287NM_000284
PDHA1hsa-miR-548ai93.287NM_000284
PDHA1hsa-miR-548ag93.287NM_000284
PDHA1hsa-miR-548ba93.287NM_000284
PDHA1hsa-miR-495-3p92.7437NM_001173454
PDHA1hsa-miR-446392.4757NM_000284
PDHA1hsa-miR-6832-5p90.9752NM_001173454
PDHA1hsa-miR-3942-3p90.6952NM_000284
PDHA1hsa-miR-584-5p89.8637NM_001173454
PDHA1hsa-miR-3529-3p87.6919NM_001173454
PDHA1hsa-miR-4789-5p85.808NM_000284
PDHA1hsa-miR-653-5p83.2624NM_001173454
PDHA1hsa-miR-7849-3p82.8973NM_000284
PDHA1hsa-miR-127682.0953NM_001173454
PDHA1hsa-miR-203a-3p81.764NM_001173454
PDHA1hsa-miR-616-5p80.8855NM_001173454
PDHA1hsa-miR-371b-5p80.8855NM_001173454
PDHA1hsa-miR-373-5p80.8855NM_001173454
PDHA1hsa-miR-10b-3p80.6801NM_000284
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Motifs and transcription factors (TFs) regulating PDHA1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PDHA1hdpi__TP73TP73 (directAnnotation).
PDHA1metacluster_55.5ZNF541 (directAnnotation).
PDHA1dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
PDHA1taipale_tf_pairs__TFAP2C_MAX_TNSCCNNNGGSNNNCACGTGN_CAP_reprMAX; TFAP2C (directAnnotation).
PDHA1metacluster_174.3MBD2; NFYA; NFYB; NFYC; PBX3 (directAnnotation).
PDHA1taipale_tf_pairs__FOXO1_ELK1_RSCGGATGTTRTN_CAPELK1; FOXO1 (directAnnotation).
PDHA1stark__RCGCMATTWYY1 (inferredBy_Orthology).
PDHA1taipale_tf_pairs__ETV2_FOXO6_RCCGGATGTTKWN_CAPETV2; FOXO6 (directAnnotation).
PDHA1taipale_tf_pairs__FOXO1_ETV4_RCCGGAWGTKKN_CAPETV4; FOXO1 (directAnnotation).
PDHA1metacluster_174.6NFYA; NFYB; NFYB; NFYC (directAnnotation).
PDHA1transfac_pro__M06032ZNF727 (directAnnotation).
PDHA1taipale_tf_pairs__ETV2_FOXI1_RNCGGAANNAAACA_CAP_reprETV2; FOXI1 (directAnnotation).
PDHA1jaspar__MA0502.2NFYB (directAnnotation).
PDHA1cisbp__M00808MYPOP (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
PDHA1"NADH"

DB00157

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."