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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: PDE3B

Summary for PDE3B

Gene informationGene symbol

PDE3B

Ensembl ID

ENSG00000152270

Entrez ID

5140

Gene namephosphodiesterase 3B
SynonymsHcGIP1
Gene typeprotein_coding
UniProtAcc

Q13370


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Dataset with differentially expressed gene: PDE3B

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD4+ T cells0.4322960.00e+00

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNACD4+ T cells0.2604258.78e-04

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postCD8+ T cells0.3099836.30e-15

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Expression of PDE3B in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PDE3B

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PDE3B

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PDE3Bhsa-miR-519c-3p97.2333NM_000922
PDE3Bhsa-miR-519a-3p97.2333NM_000922
PDE3Bhsa-miR-519b-3p97.2333NM_000922
PDE3Bhsa-miR-64195.8881NM_000922
PDE3Bhsa-miR-3617-5p95.8881NM_000922
PDE3Bhsa-miR-4711-5p95.7356NM_000922
PDE3Bhsa-miR-428295.7124NM_000922
PDE3Bhsa-miR-186-5p95.0208NM_000922
PDE3Bhsa-miR-590-3p94.6255NM_000922
PDE3Bhsa-miR-20a-5p94.2173NM_000922
PDE3Bhsa-miR-17-5p94.2173NM_000922
PDE3Bhsa-miR-93-5p94.2173NM_000922
PDE3Bhsa-miR-106a-5p94.2173NM_000922
PDE3Bhsa-miR-106b-5p94.2173NM_000922
PDE3Bhsa-miR-519d-3p94.2173NM_000922
PDE3Bhsa-miR-20b-5p94.2173NM_000922
PDE3Bhsa-miR-205-5p94.0136NM_000922
PDE3Bhsa-miR-605-5p92.3032NM_000922
PDE3Bhsa-miR-548e-5p92.0659NM_000922
PDE3Bhsa-miR-514b-5p91.6337NM_000922
PDE3Bhsa-miR-513c-5p91.6337NM_000922
PDE3Bhsa-miR-10791.201NM_000922
PDE3Bhsa-miR-103a-3p91.201NM_000922
PDE3Bhsa-miR-526b-3p91.1526NM_000922
PDE3Bhsa-miR-7111-3p89.1317NM_000922
PDE3Bhsa-miR-196a-1-3p88.7238NM_000922
PDE3Bhsa-miR-120088.6381NM_000922
PDE3Bhsa-miR-27b-3p88.1431NM_000922
PDE3Bhsa-miR-998588.1431NM_000922
PDE3Bhsa-miR-27a-3p88.1431NM_000922
PDE3Bhsa-miR-5692a87.913NM_000922
PDE3Bhsa-miR-144-3p87.9075NM_000922
PDE3Bhsa-miR-10394-5p87.2006NM_000922
PDE3Bhsa-miR-120587.2006NM_000922
PDE3Bhsa-miR-15a-5p87.1203NM_000922
PDE3Bhsa-miR-6838-5p87.1203NM_000922
PDE3Bhsa-miR-497-5p87.1203NM_000922
PDE3Bhsa-miR-15b-5p87.1203NM_000922
PDE3Bhsa-miR-424-5p87.1203NM_000922
PDE3Bhsa-miR-16-5p87.1203NM_000922
PDE3Bhsa-miR-195-5p87.1203NM_000922
PDE3Bhsa-miR-4743-3p86.8438NM_000922
PDE3Bhsa-miR-7157-5p86.4292NM_000922
PDE3Bhsa-miR-515-5p86.0899NM_000922
PDE3Bhsa-miR-519e-5p86.0899NM_000922
PDE3Bhsa-miR-453186.0544NM_000922
PDE3Bhsa-miR-548ao-5p85.7375NM_000922
PDE3Bhsa-miR-548ax85.7375NM_000922
PDE3Bhsa-miR-6769b-3p85.6124NM_000922
PDE3Bhsa-miR-4723-3p85.6124NM_000922
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Motifs and transcription factors (TFs) regulating PDE3B

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PDE3Btransfac_pro__M05481ZNF202 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
PDE3B"3-isobutyl-1-methyl-7H-xanthine"

DB07954

small molecule
PDE3B"6-(4-{[2-(3-iodobenzyl)-3-oxocyclohex-1-en-1-yl]amino}phenyl)-5-methyl-4,5-dihydropyridazin-3(2H)-o

DB01640

small molecule
PDE3B"Amrinone"

DB01427

small molecule
PDE3B"Hg9a-9, Nonanoyl-N-Hydroxyethylglucamide"

DB01970

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."