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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PCNX1

Summary for PCNX1

Gene informationGene symbol

PCNX1

Ensembl ID

ENSG00000100731

Entrez ID

22990

Gene namepecanex 1
SynonymsKIAA0805|KIAA0995|PCNX|PCNXL1|pecanex
Gene typeprotein_coding
UniProtAcc

Q96RV3


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Dataset with differentially expressed gene: PCNX1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro0.2607791.08e-05

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postFibroblasts-0.6214888.70e-03

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Expression of PCNX1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PCNX1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PCNX1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PCNX1hsa-miR-561-3p98.7756NM_014982
PCNX1hsa-miR-428298.5362NM_014982
PCNX1hsa-miR-4671-3p98.2726NM_014982
PCNX1hsa-miR-182-5p98.0242NM_014982
PCNX1hsa-miR-442297.338NM_014982
PCNX1hsa-miR-364697.1297NM_014982
PCNX1hsa-miR-670-3p97.0894NM_014982
PCNX1hsa-miR-216a-3p96.5928NM_014982
PCNX1hsa-miR-128-3p96.5928NM_014982
PCNX1hsa-miR-5584-5p96.2333NM_014982
PCNX1hsa-miR-432896.13NM_014982
PCNX1hsa-miR-5011-5p95.7649NM_014982
PCNX1hsa-miR-6824-3p95.689NM_014982
PCNX1hsa-miR-6764-3p95.689NM_014982
PCNX1hsa-miR-3681-3p95.34NM_014982
PCNX1hsa-miR-190a-3p95.2482NM_014982
PCNX1hsa-miR-4778-3p95.0378NM_014982
PCNX1hsa-miR-447094.9026NM_014982
PCNX1hsa-miR-1537-5p94.867NM_014982
PCNX1hsa-miR-670-5p94.5768NM_014982
PCNX1hsa-miR-27a-3p94.2704NM_014982
PCNX1hsa-miR-27b-3p94.2704NM_014982
PCNX1hsa-miR-998594.2704NM_014982
PCNX1hsa-miR-548e-5p94.1507NM_014982
PCNX1hsa-miR-60393.6483NM_014982
PCNX1hsa-miR-6830-5p92.692NM_014982
PCNX1hsa-miR-3688-3p92.5927NM_014982
PCNX1hsa-miR-4668-5p92.4502NM_014982
PCNX1hsa-miR-548an92.1218NM_014982
PCNX1hsa-miR-26b-5p91.7898NM_014982
PCNX1hsa-miR-129791.7898NM_014982
PCNX1hsa-miR-26a-5p91.7898NM_014982
PCNX1hsa-miR-1213691.2917NM_014982
PCNX1hsa-miR-57791.1844NM_014982
PCNX1hsa-miR-143-5p91.1037NM_014982
PCNX1hsa-miR-410-3p90.9423NM_014982
PCNX1hsa-miR-446590.6155NM_014982
PCNX1hsa-miR-539-5p90.3741NM_014982
PCNX1hsa-miR-314890.1939NM_014982
PCNX1hsa-miR-651-3p89.7483NM_014982
PCNX1hsa-miR-205-5p89.2346NM_014982
PCNX1hsa-miR-568089.1656NM_014982
PCNX1hsa-miR-4649-3p88.8604NM_014982
PCNX1hsa-miR-205-3p88.7607NM_014982
PCNX1hsa-miR-186-5p88.747NM_014982
PCNX1hsa-miR-454-3p87.9918NM_014982
PCNX1hsa-miR-426687.4998NM_014982
PCNX1hsa-miR-383-5p87.3959NM_014982
PCNX1hsa-miR-130b-5p87.3494NM_014982
PCNX1hsa-miR-10401-5p86.4119NM_014982
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Motifs and transcription factors (TFs) regulating PCNX1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PCNX1taipale_tf_pairs__TFAP2C_E2F8_NNTCCCGCNNNCCNNNGGC_CAP_reprE2F8; TFAP2C (directAnnotation).
PCNX1dbtfbs__ZBTB8A_HEK293_ENCSR481FEC_merged_N1ZBTB8A (directAnnotation).
PCNX1swissregulon__hs__CHD1CHD1 (directAnnotation).
PCNX1metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
PCNX1taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
PCNX1kznf__ZNF846_Imbeault2017_RP_ChIP-seqZNF846 (directAnnotation).
PCNX1transfac_pro__M12686ZBTB10 (directAnnotation).
PCNX1taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
PCNX1metacluster_143.14ZNF320 (directAnnotation).
PCNX1kznf__ZNF383_Imbeault2017_RP_RCADEZNF383 (directAnnotation).
PCNX1dbtfbs__ZBTB10_HEK293_ENCSR004PLU_merged_N1ZBTB10 (directAnnotation).
PCNX1metacluster_144.8ZNF30; ZNF30 (directAnnotation).
PCNX1taipale_cyt_meth__ZBTB37_NYACCGCRNNYACCGYR_eDBD_meth_reprZBTB37 (directAnnotation).
PCNX1metacluster_23.9GLIS1; GLIS3; GLIS3; ZNF575 (directAnnotation). GLIS2; GLIS2; GLIS3; ZNF575; ZXDA; ZXDA; ZXDA; ZXDA; ZXDB; ZXDB; ZXDB; ZXDB; ZXDC; ZXDC; ZXDC; ZXDC (inferredBy_Orthology).
PCNX1metacluster_61.1DEAF1; DEAF1 (directAnnotation).
PCNX1kznf__ZNF548_Imbeault2017_RP_RCADEZNF548 (directAnnotation).
PCNX1kznf__ZNF141_Imbeault2017_RP_RCADEZNF141 (directAnnotation).
PCNX1transfac_pro__M04617ZBTB7A (directAnnotation).
PCNX1transfac_pro__M01973PLAG1 (directAnnotation).
PCNX1metacluster_151.2ZNF23 (directAnnotation).
PCNX1metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
PCNX1taipale_tf_pairs__TFAP2C_HES7_NNCRCGYGNNNNNNSCCNNNGGS_CAP_reprHES7; TFAP2C (directAnnotation).
PCNX1metacluster_66.1MTF1; ZNF320; ZNF320; ZNF320; ZNF782 (directAnnotation).
PCNX1cisbp__M01864EGR1 (inferredBy_Orthology).
PCNX1tfdimers__MD00391KLF4 (directAnnotation).
PCNX1kznf__ZNF267_Imbeault2017_RP_RCADEZNF267 (directAnnotation).
PCNX1transfac_pro__M05479ZNF580 (directAnnotation).
PCNX1tfdimers__MD00151CHURC1 (directAnnotation).
PCNX1transfac_pro__M04817ZBTB33 (directAnnotation).
PCNX1cisbp__M00139ZNF281 (inferredBy_Orthology).
PCNX1taipale_tf_pairs__TFAP2C_HES7_NNCRCGYGNNNNNNNSCCNNNGGS_CAP_reprHES7; TFAP2C (directAnnotation).
PCNX1metacluster_144.5ZNF610; ZNF610; ZNF610 (directAnnotation).
PCNX1transfac_public__M00491PATZ1 (directAnnotation).
PCNX1taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
PCNX1metacluster_3.10KLF2; KLF4 (directAnnotation).
PCNX1jaspar__MA1122.1TFDP1 (directAnnotation).
PCNX1kznf__ZNF90_Imbeault2017_OM_RCADEZNF90 (directAnnotation).
PCNX1transfac_pro__M01253CNOT3 (directAnnotation).
PCNX1metacluster_159.5ZIC1; ZIC4; ZNF423 (directAnnotation). SP1 (inferredBy_Orthology).
PCNX1cisbp__M00968MTF2 (directAnnotation).
PCNX1tfdimers__MD00038TFAP2C (directAnnotation).
PCNX1taipale_tf_pairs__E2F3_TBX21_NGGTGTGNNGGCGCSN_CAP_reprE2F3; TBX21 (directAnnotation).
PCNX1metacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
PCNX1transfac_pro__M01199TRIM28 (directAnnotation).
PCNX1metacluster_115.1NEUROD1; PHF1; ZBTB20; ZNF17; ZNF296; ZNF350; ZNF486; ZNF574; ZNF589; ZNF891 (directAnnotation). IRF4; IRF6; PRDM5 (inferredBy_Orthology).
PCNX1metacluster_3.14WT1; WT1 (directAnnotation).
PCNX1transfac_pro__M12697ZNF142 (directAnnotation).
PCNX1metacluster_84.2RARA (directAnnotation).
PCNX1transfac_pro__M01122ZNF219 (directAnnotation).
PCNX1transfac_pro__M07387ZBTB7A (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."