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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene (This gene does not contain this module)

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PCDHA12

Summary for PCDHA12

Gene informationGene symbol

PCDHA12

Ensembl ID

ENSG00000251664

Entrez ID

56137

Gene nameprotocadherin alpha 12
SynonymsPCDH-ALPHA12
Gene typeprotein_coding
UniProtAcc

Q9UN75


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Dataset with differentially expressed gene: PCDHA12

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells-0.6319836.59e-03

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Expression of PCDHA12 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PCDHA12

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PCDHA12

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PCDHA12hsa-miR-4753-3p99.8097NM_018903
PCDHA12hsa-miR-6809-3p99.4549NM_018903
PCDHA12hsa-miR-6871-5p98.9017NM_018903
PCDHA12hsa-miR-130a-5p98.2104NM_018903
PCDHA12hsa-miR-430697.2905NM_018903
PCDHA12hsa-miR-185-5p96.113NM_018903
PCDHA12hsa-miR-464496.113NM_018903
PCDHA12hsa-miR-6731-5p96.075NM_018903
PCDHA12hsa-miR-808596.075NM_018903
PCDHA12hsa-miR-4766-3p96.0112NM_018903
PCDHA12hsa-miR-426295.1229NM_018903
PCDHA12hsa-miR-181d-5p94.3489NM_018903
PCDHA12hsa-miR-181b-5p94.3489NM_018903
PCDHA12hsa-miR-181a-5p94.3489NM_018903
PCDHA12hsa-miR-181c-5p94.3489NM_018903
PCDHA12hsa-miR-29a-3p94.2031NM_018903
PCDHA12hsa-miR-29b-3p94.2031NM_018903
PCDHA12hsa-miR-29c-3p94.2031NM_018903
PCDHA12hsa-miR-365894.0407NM_018903
PCDHA12hsa-miR-442993.2554NM_018903
PCDHA12hsa-miR-320d93.2554NM_018903
PCDHA12hsa-miR-320a-3p93.2554NM_018903
PCDHA12hsa-miR-320c93.2554NM_018903
PCDHA12hsa-miR-320b93.2554NM_018903
PCDHA12hsa-miR-19a-3p92.0995NM_018903
PCDHA12hsa-miR-19b-3p92.0995NM_018903
PCDHA12hsa-miR-106a-5p92.0872NM_018903
PCDHA12hsa-miR-548g-5p91.5599NM_018903
PCDHA12hsa-miR-548x-5p91.5599NM_018903
PCDHA12hsa-miR-548aj-5p91.5599NM_018903
PCDHA12hsa-miR-548f-5p91.5599NM_018903
PCDHA12hsa-miR-17-5p91.1931NM_018903
PCDHA12hsa-miR-20a-5p90.9737NM_018903
PCDHA12hsa-miR-106b-5p90.9737NM_018903
PCDHA12hsa-miR-75990.8017NM_018903
PCDHA12hsa-miR-4703-5p90.4754NM_018903
PCDHA12hsa-miR-526b-3p90.3783NM_018903
PCDHA12hsa-miR-6835-3p90.3433NM_018903
PCDHA12hsa-miR-3942-5p89.8822NM_018903
PCDHA12hsa-miR-6878-5p89.5215NM_018903
PCDHA12hsa-miR-20b-5p89.291NM_018903
PCDHA12hsa-miR-93-5p89.291NM_018903
PCDHA12hsa-miR-519d-3p89.291NM_018903
PCDHA12hsa-miR-3619-3p88.8751NM_018903
PCDHA12hsa-miR-6824-5p88.1444NM_018903
PCDHA12hsa-miR-767-3p87.7479NM_018903
PCDHA12hsa-miR-194-3p87.5614NM_018903
PCDHA12hsa-miR-568387.3895NM_018903
PCDHA12hsa-miR-6794-3p87.2358NM_018903
PCDHA12hsa-miR-6799-3p85.6302NM_018903
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Motifs and transcription factors (TFs) regulating PCDHA12

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."