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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PCDH7

Summary for PCDH7

Gene informationGene symbol

PCDH7

Ensembl ID

ENSG00000169851

Entrez ID

5099

Gene nameprotocadherin 7
SynonymsBH-Pcdh|PPP1R120
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: PCDH7

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells0.3629356.12e-26

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells0.4798997.98e-35

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells0.3632661.27e-16

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells0.3302050.00e+00

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Expression of PCDH7 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PCDH7

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PCDH7

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PCDH7hsa-miR-491-3p98.8832NM_001173523
PCDH7hsa-miR-4766-5p98.5781NM_001173523
PCDH7hsa-miR-655-3p96.8384NM_032457
PCDH7hsa-miR-374c-5p96.8384NM_032457
PCDH7hsa-miR-4693-5p96.3716NM_001173523
PCDH7hsa-miR-60095.9866NM_001173523
PCDH7hsa-miR-1277-5p95.7837NM_032457
PCDH7hsa-miR-190a-3p95.6008NM_001173523
PCDH7hsa-miR-670-5p95.1342NM_001173523
PCDH7hsa-miR-101-3p94.3673NM_001173523
PCDH7hsa-miR-92a-3p94.1515NM_001173523
PCDH7hsa-miR-32-5p94.1515NM_001173523
PCDH7hsa-miR-92b-3p94.1515NM_001173523
PCDH7hsa-miR-589-3p94.1051NM_001173523
PCDH7hsa-miR-3680-3p94.0697NM_001173523
PCDH7hsa-miR-7156-5p93.9008NM_032457
PCDH7hsa-miR-548ar-3p93.8681NM_032457
PCDH7hsa-miR-6885-3p93.8055NM_001173523
PCDH7hsa-miR-4795-3p93.5825NM_001173523
PCDH7hsa-miR-427593.5549NM_001173523
PCDH7hsa-miR-548az-3p93.4137NM_032457
PCDH7hsa-miR-196a-1-3p93.2224NM_032457
PCDH7hsa-miR-129092.48NM_002589
PCDH7hsa-miR-4760-5p92.118NM_002589
PCDH7hsa-miR-365892.0875NM_001173523
PCDH7hsa-miR-6818-3p91.6464NM_001173523
PCDH7hsa-miR-443291.6169NM_002589
PCDH7hsa-miR-9-5p91.4182NM_001173523
PCDH7hsa-miR-363-3p91.1258NM_001173523
PCDH7hsa-miR-367-3p91.1258NM_001173523
PCDH7hsa-miR-25-3p91.1258NM_001173523
PCDH7hsa-miR-548e-3p91.1051NM_032457
PCDH7hsa-miR-548bc91.1051NM_032457
PCDH7hsa-miR-548a-3p91.1051NM_032457
PCDH7hsa-miR-548f-3p91.1051NM_032457
PCDH7hsa-miR-9-3p90.7158NM_001173523
PCDH7hsa-miR-427390.604NM_032457
PCDH7hsa-miR-520h90.3728NM_032457
PCDH7hsa-miR-520g-3p90.3728NM_032457
PCDH7hsa-miR-5004-3p90.2701NM_002589
PCDH7hsa-miR-656-3p90.1522NM_001173523
PCDH7hsa-miR-144-3p89.6017NM_001173523
PCDH7hsa-miR-366289.5989NM_032457
PCDH7hsa-miR-323a-3p89.5915NM_001173523
PCDH7hsa-miR-431989.1406NM_001173523
PCDH7hsa-miR-548g-3p89.0201NM_032457
PCDH7hsa-miR-60788.8896NM_032457
PCDH7hsa-miR-314388.7548NM_001173523
PCDH7hsa-miR-7152-3p88.684NM_001173523
PCDH7hsa-miR-5692a88.3795NM_001173523
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Motifs and transcription factors (TFs) regulating PCDH7

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PCDH7taipale_tf_pairs__MEIS1_ELF1_NTGCCGGAAGTN_CAP_reprELF1; MEIS1 (directAnnotation).
PCDH7taipale_tf_pairs__ETV5_HOXA2_RSCGGWAATKR_CAPETV5; HOXA2 (directAnnotation).
PCDH7taipale_tf_pairs__ETV5_FOXI1_RSCGGATGTTGN_CAPETV5; FOXI1 (directAnnotation).
PCDH7taipale_tf_pairs__HOXB2_ELK3_RSCGGAAGTMRTTA_CAPELK3; HOXB2 (directAnnotation).
PCDH7taipale_tf_pairs__HOXB2_ETV4_ACCGGAAATGAN_CAPETV4; HOXB2 (directAnnotation).
PCDH7hdpi__TP73TP73 (directAnnotation).
PCDH7taipale_tf_pairs__ERF_HES7_NCCGGAANNNNNNCACGYGNN_CAP_reprERF; HES7 (directAnnotation).
PCDH7jaspar__MA1957.1ELK1 (directAnnotation).
PCDH7metacluster_187.7FEZF1; FEZF1; ZNF384; ZNF384; ZNF384 (directAnnotation). OVOL2; OVOL3; PEG3; PLAG1; PLAGL1; PLAGL2; REST; SCAND1; ZKSCAN2; ZNF131; ZNF174; ZNF18; ZNF202; ZNF274; ZNF444; ZNF446; ZNF496; ZNF518A; ZNF518B; ZNF576; ZNF641; ZNF770; ZSCAN1; ZSCAN18; ZSCAN29; ZSCAN32; ZSCAN5A; ZSCAN5B; ZSCAN5C (inferredBy_Orthology).
PCDH7metacluster_130.3ZNF492; ZNF492 (directAnnotation). OVOL2; OVOL3; PEG3; PLAG1; PLAGL1; PLAGL2; REST; SCAND1; ZKSCAN2; ZNF131; ZNF174; ZNF18; ZNF202; ZNF274; ZNF444; ZNF446; ZNF496; ZNF518A; ZNF518B; ZNF576; ZNF641; ZNF770; ZSCAN1; ZSCAN18; ZSCAN29; ZSCAN32; ZSCAN5A; ZSCAN5B; ZSCAN5C (inferredBy_Orthology).
PCDH7swissregulon__mm__Atf2ATF2 (inferredBy_Orthology).
PCDH7transfac_pro__M05770ZNF77 (directAnnotation).
PCDH7transfac_pro__M06602ZNF669 (directAnnotation).
PCDH7jaspar__MA0079.5SP1 (directAnnotation).
PCDH7kznf__KLF1_Barrera2016.2_PBMKLF1 (directAnnotation).
PCDH7hdpi__NFIXNFIX (directAnnotation).
PCDH7cisbp__M07938E2F1 (directAnnotation).
PCDH7transfac_pro__M07260IKZF1 (directAnnotation).
PCDH7transfac_pro__M01835KLF4 (directAnnotation).
PCDH7hocomoco__PATZ1_HUMAN.H11MO.1.CPATZ1 (directAnnotation).
PCDH7swissregulon__hs__MTA3MTA3 (directAnnotation).
PCDH7transfac_pro__M07270TEAD4 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."