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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PAPSS2

Summary for PAPSS2

Gene informationGene symbol

PAPSS2

Ensembl ID

ENSG00000198682

Entrez ID

9060

Gene name3'-phosphoadenosine 5'-phosphosulfate synthase 2
SynonymsATPSK2
Gene typeprotein_coding
UniProtAcc

O95340


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Dataset with differentially expressed gene: PAPSS2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro0.3036561.03e-11

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells0.79640.00e+00

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Expression of PAPSS2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PAPSS2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PAPSS2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PAPSS2hsa-miR-6867-5p99.3107NM_004670
PAPSS2hsa-miR-5011-5p98.9503NM_004670
PAPSS2hsa-miR-371497.2534NM_001015880
PAPSS2hsa-miR-227895.0891NM_001015880
PAPSS2hsa-miR-4753-3p94.9088NM_004670
PAPSS2hsa-miR-493-5p93.0088NM_004670
PAPSS2hsa-let-7g-3p92.7546NM_004670
PAPSS2hsa-let-7a-2-3p92.7546NM_004670
PAPSS2hsa-miR-365892.6451NM_004670
PAPSS2hsa-miR-506-3p91.9592NM_001015880
PAPSS2hsa-miR-124-3p91.9592NM_001015880
PAPSS2hsa-miR-95-5p90.7065NM_001015880
PAPSS2hsa-miR-29790.2087NM_004670
PAPSS2hsa-miR-1236-3p90.1677NM_001015880
PAPSS2hsa-miR-203a-3p90.1677NM_001015880
PAPSS2hsa-miR-190a-3p89.8989NM_004670
PAPSS2hsa-miR-130589.8253NM_001015880
PAPSS2hsa-miR-196a-3p88.2859NM_004670
PAPSS2hsa-miR-6809-3p88.0244NM_004670
PAPSS2hsa-miR-4711-5p87.6959NM_004670
PAPSS2hsa-miR-3121-3p87.0123NM_004670
PAPSS2hsa-miR-548an86.8085NM_004670
PAPSS2hsa-miR-452886.762NM_004670
PAPSS2hsa-miR-542-3p86.7495NM_004670
PAPSS2hsa-miR-758-3p86.0002NM_004670
PAPSS2hsa-miR-92b-3p85.9381NM_004670
PAPSS2hsa-miR-32-5p85.9381NM_004670
PAPSS2hsa-miR-92a-3p85.9381NM_004670
PAPSS2hsa-miR-3613-5p85.6704NM_004670
PAPSS2hsa-miR-376c-3p83.6756NM_004670
PAPSS2hsa-miR-25-3p83.426NM_004670
PAPSS2hsa-miR-363-3p83.426NM_004670
PAPSS2hsa-miR-367-3p83.426NM_004670
PAPSS2hsa-miR-34b-5p82.7896NM_004670
PAPSS2hsa-miR-2682-5p82.7896NM_004670
PAPSS2hsa-miR-449c-5p82.7896NM_004670
PAPSS2hsa-miR-432881.8767NM_001015880
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Motifs and transcription factors (TFs) regulating PAPSS2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PAPSS2dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
PAPSS2taipale_tf_pairs__GCM1_SPDEF_RTRSKGGCGGANNNNNNATCCNNN_CAP_reprGCM1; SPDEF (directAnnotation).
PAPSS2transfac_pro__M00652NRF1 (directAnnotation).
PAPSS2transfac_pro__M05612ZNF189 (directAnnotation).
PAPSS2transfac_pro__M05418ZNF521 (directAnnotation).
PAPSS2kznf__ZNF584_Imbeault2017_OM_RCADEZNF584 (directAnnotation).
PAPSS2homer__GGAAATTCCC_NFkB-p65-RelRELA (inferredBy_Orthology).
PAPSS2tfdimers__MD00208IRF1; LTF (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."