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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PAF1

Summary for PAF1

Gene informationGene symbol

PAF1

Ensembl ID

ENSG00000006712

Entrez ID

54623

Gene namePAF1 homolog, Paf1/RNA polymerase II complex component
SynonymsF23149_1|FLJ11123|PD2
Gene typeprotein_coding
UniProtAcc

Q8N7H5


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Dataset with differentially expressed gene: PAF1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-1.805350.00e+00

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.278310.00e+00

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Expression of PAF1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PAF1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PAF1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PAF1hsa-miR-495-3p97.5587NM_001256826
PAF1hsa-miR-568897.5587NM_001256826
PAF1hsa-miR-314889.9422NM_001256826
PAF1hsa-miR-302e86.8127NM_019088
PAF1hsa-miR-222-3p84.788NM_001256826
PAF1hsa-miR-221-3p84.788NM_001256826
PAF1hsa-miR-6780b-5p84.6275NM_001256826
PAF1hsa-miR-4725-3p84.6275NM_001256826
PAF1hsa-miR-3120-3p83.9785NM_001256826
PAF1hsa-miR-520b-3p83.6688NM_019088
PAF1hsa-miR-302d-3p83.6688NM_019088
PAF1hsa-miR-520d-3p83.6688NM_019088
PAF1hsa-miR-302b-3p83.6688NM_019088
PAF1hsa-miR-373-3p83.6688NM_019088
PAF1hsa-miR-302c-3p83.6688NM_019088
PAF1hsa-miR-302a-3p83.6688NM_019088
PAF1hsa-miR-520c-3p83.6688NM_019088
PAF1hsa-miR-372-3p83.6688NM_019088
PAF1hsa-miR-520e-3p83.6688NM_019088
PAF1hsa-miR-520a-3p83.6688NM_019088
PAF1hsa-miR-427183.154NM_001256826
PAF1hsa-miR-27a-5p81.9677NM_001256826
PAF1hsa-miR-378g80.12NM_001256826
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Motifs and transcription factors (TFs) regulating PAF1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PAF1dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
PAF1transfac_pro__M04862NRF1 (directAnnotation).
PAF1taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."