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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PACSIN1

Summary for PACSIN1

Gene informationGene symbol

PACSIN1

Ensembl ID

ENSG00000124507

Entrez ID

29993

Gene nameprotein kinase C and casein kinase substrate in neurons 1
SynonymsSDPI
Gene typeprotein_coding
UniProtAcc

Q9BY11


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Dataset with differentially expressed gene: PACSIN1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postpDCs-0.6976672.41e-04

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Expression of PACSIN1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PACSIN1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PACSIN1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PACSIN1hsa-miR-5011-5p99.9673NM_020804
PACSIN1hsa-miR-190a-3p99.9051NM_020804
PACSIN1hsa-miR-7106-5p96.3512NM_020804
PACSIN1hsa-miR-6825-5p96.1843NM_020804
PACSIN1hsa-miR-4728-5p94.8537NM_020804
PACSIN1hsa-miR-149-3p94.0506NM_020804
PACSIN1hsa-miR-6785-5p93.98NM_020804
PACSIN1hsa-miR-6880-5p92.2461NM_020804
PACSIN1hsa-miR-6883-5p91.0031NM_020804
PACSIN1hsa-miR-100-3p89.6219NM_020804
PACSIN1hsa-miR-320288.4437NM_020804
PACSIN1hsa-miR-6721-5p85.747NM_001199583
PACSIN1hsa-miR-125b-2-3p84.9256NM_001199583
PACSIN1hsa-miR-205284.6029NM_020804
PACSIN1hsa-miR-448184.1378NM_001199583
PACSIN1hsa-miR-4680-5p83.945NM_001199583
PACSIN1hsa-miR-654-3p81.3977NM_020804
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Motifs and transcription factors (TFs) regulating PACSIN1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PACSIN1tfdimers__MD00274MYCN (directAnnotation).
PACSIN1transfac_pro__M03847SOX15 (directAnnotation).
PACSIN1taipale_tf_pairs__ELK1_FOXI1_RSCGGAANNRTMAAYAN_CAP_reprELK1; FOXI1 (directAnnotation).
PACSIN1tfdimers__MD00068HSF2; MYCN (directAnnotation).
PACSIN1transfac_pro__M05664ZNF853 (directAnnotation).
PACSIN1tfdimers__MD00273GATA1; GATA2; GATA3; GATA4; GATA5; GATA6; MZF1 (directAnnotation).
PACSIN1taipale_tf_pairs__ARNTL_BHLHA15_RKCACGTGNNNMCATATGKN_CAP_reprARNTL; BHLHA15 (directAnnotation).
PACSIN1transfac_pro__M05933ZNF552 (directAnnotation).
PACSIN1transfac_pro__M06470ZNF441 (directAnnotation).
PACSIN1metacluster_130.18FOXD2; FOXD2 (directAnnotation). FOXA2; FOXD2; FOXD2 (inferredBy_Orthology).
PACSIN1swissregulon__hs__ZKSCAN3ZKSCAN3 (directAnnotation).
PACSIN1tfdimers__MD00517POU5F1 (directAnnotation).
PACSIN1tfdimers__MD00502PBX1; SOX9 (directAnnotation).
PACSIN1kznf__ZNF136_Imbeault2017_RP_RCADEZNF136 (directAnnotation).
PACSIN1tfdimers__MD00269CRX; PBX1 (directAnnotation).
PACSIN1taipale_cyt_meth__TLX3_NAATTGNNNNNNNNNNCAATTN_FL_reprTLX3 (directAnnotation).
PACSIN1taipale_tf_pairs__ELK1_FOXI1_RSCGGAANNRTMAAYA_CAP_reprELK1; FOXI1 (directAnnotation).
PACSIN1tfdimers__MD00330FOXP3; HSF1 (directAnnotation).
PACSIN1tfdimers__MD00599NR1I2; RXRA; STAT1 (directAnnotation).
PACSIN1tfdimers__MD00478SOX10; ZNF217 (directAnnotation).
PACSIN1tfdimers__MD00064E2F1; LTF (directAnnotation).
PACSIN1transfac_pro__M05462ZNF581 (directAnnotation).
PACSIN1tfdimers__MD00602MYB; STAT6 (directAnnotation).
PACSIN1hocomoco__HMBX1_HUMAN.H11MO.0.DHMBOX1 (directAnnotation).
PACSIN1tfdimers__MD00090FOS; FOXG1; FOXO1 (directAnnotation).
PACSIN1transfac_pro__M04906SIN3A (directAnnotation).
PACSIN1taipale_tf_pairs__TEAD4_PITX1_RCATWCYNNNNTAATCC_CAP_reprPITX1; TEAD4 (directAnnotation).
PACSIN1transfac_pro__M06116ZNF28 (directAnnotation).
PACSIN1transfac_pro__M06425ZNF227 (directAnnotation).
PACSIN1tfdimers__MD00494SOX9; TBP (directAnnotation).
PACSIN1transfac_pro__M04861SIX5 (directAnnotation).
PACSIN1transfac_pro__M06122ZNF43 (directAnnotation).
PACSIN1transfac_pro__M05668ZNF154 (directAnnotation).
PACSIN1metacluster_70.17POU1F1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."