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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: P4HA1

Summary for P4HA1

Gene informationGene symbol

P4HA1

Ensembl ID

ENSG00000122884

Entrez ID

5033

Gene nameprolyl 4-hydroxylase subunit alpha 1
SynonymsC-P4Halpha(I)|P4HA
Gene typeprotein_coding
UniProtAcc

P13674


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Dataset with differentially expressed gene: P4HA1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.3154544.92e-21

GSE150930

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaMucosa-assisted lymphoid tissue (MALT) lymphomaImmunotherapyrituximab + cyclophosphamide + fludarabineNAMalignant cells-0.2807053.81e-14

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells-0.7823910.00e+00

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.2708447.68e-40

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.3571720.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3074493.42e-18

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Expression of P4HA1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to P4HA1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating P4HA1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
P4HA1hsa-miR-569497.0577NM_000917
P4HA1hsa-miR-506-3p96.8133NM_000917
P4HA1hsa-miR-124-3p96.8133NM_000917
P4HA1hsa-miR-491-3p96.246NM_001142595
P4HA1hsa-miR-3912-5p95.7248NM_000917
P4HA1hsa-miR-5582-5p94.5463NM_000917
P4HA1hsa-miR-616594.3669NM_001142595
P4HA1hsa-miR-122-5p92.8103NM_000917
P4HA1hsa-miR-990292.0753NM_001142595
P4HA1hsa-miR-391090.6641NM_000917
P4HA1hsa-miR-197-3p89.4999NM_001142595
P4HA1hsa-miR-371487.7772NM_000917
P4HA1hsa-miR-6500-5p87.6441NM_001142595
P4HA1hsa-miR-4633-3p87.6441NM_001142595
P4HA1hsa-miR-215-3p87.6114NM_001142595
P4HA1hsa-miR-365985.9209NM_000917
P4HA1hsa-miR-426384.9527NM_001142595
P4HA1hsa-miR-7106-5p84.4241NM_001142595
P4HA1hsa-miR-1245b-3p84.3941NM_000917
P4HA1hsa-miR-490-5p84.0094NM_000917
P4HA1hsa-miR-3152-3p83.3509NM_000917
P4HA1hsa-miR-443983.2316NM_001142595
P4HA1hsa-miR-3136-5p83.2316NM_001142595
P4HA1hsa-miR-504-3p81.7075NM_000917
P4HA1hsa-miR-30e-5p81.3635NM_000917
P4HA1hsa-miR-30c-5p81.3635NM_000917
P4HA1hsa-miR-30d-5p81.3635NM_000917
P4HA1hsa-miR-30a-5p81.3635NM_000917
P4HA1hsa-miR-30b-5p81.3635NM_000917
P4HA1hsa-miR-3529-3p80.4729NM_001142595
P4HA1hsa-miR-607280.0672NM_000917
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Motifs and transcription factors (TFs) regulating P4HA1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
P4HA1metacluster_7.13ZFX (directAnnotation).
P4HA1metacluster_151.2ZNF23 (directAnnotation).
P4HA1metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
P4HA1transfac_pro__M05479ZNF580 (directAnnotation).
P4HA1metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
P4HA1kznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
P4HA1metacluster_144.3ZNF704; ZNF704 (directAnnotation).
P4HA1jaspar__MA0748.2YY2 (directAnnotation).
P4HA1transfac_pro__M05628ZNF735 (directAnnotation).
P4HA1homer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
P4HA1metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
P4HA1jaspar__MA1933.1SREBF2 (directAnnotation).
P4HA1jaspar__MA0079.5SP1 (directAnnotation).
P4HA1kznf__ZNF282_Imbeault2017_OM_RCADEZNF282 (directAnnotation).
P4HA1kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
P4HA1cisbp__M00968MTF2 (directAnnotation).
P4HA1metacluster_160.20JUND; PRDM15 (directAnnotation).
P4HA1cisbp__M00341PAX6 (directAnnotation).
P4HA1metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
P4HA1metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
P4HA1jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
P4HA1metacluster_61.1DEAF1; DEAF1 (directAnnotation).
P4HA1cisbp__M00788ZFY (inferredBy_Orthology).
P4HA1kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
P4HA1hdpi__ZNF304ZNF304 (directAnnotation).
P4HA1transfac_pro__M02844BCL6B (inferredBy_Orthology).
P4HA1metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
P4HA1metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
P4HA1transfac_pro__M01199TRIM28 (directAnnotation).
P4HA1kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
P4HA1transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
P4HA1transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
P4HA1transfac_pro__M03806ZBTB7C (directAnnotation).
P4HA1transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
P4HA1tfdimers__MD00154MZF1; SREBF1 (directAnnotation).
P4HA1cisbp__M01863ZNF711 (inferredBy_Orthology).
P4HA1taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
P4HA1homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
P4HA1taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
P4HA1kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
P4HA1taipale_cyt_meth__KLF12_NGCCGACGCCCW_FL_meth_reprKLF12 (directAnnotation).
P4HA1taipale__ELK1_full_NACTTCCGSCGGAARMN_reprELK1 (directAnnotation).
P4HA1transfac_pro__M04950EGR1 (directAnnotation).
P4HA1jaspar__MA1117.1RELB (directAnnotation).
P4HA1taipale__MYBL2_DBD_AACCGTTAACGGNNMYBL2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
P4HA1"Ascorbic acid"

DB00126

small molecule
P4HA1"Hydralazine"

DB01275

small molecule
P4HA1"Proline"

DB00172

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."